Lacrimispora xylanolytica: OW255_11335
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Entry
OW255_11335 CDS
T08662
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lxa
Lacrimispora xylanolytica
Brite
KEGG Orthology (KO) [BR:
lxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lxa03009
]
OW255_11335 (rimO)
Enzymes [BR:
lxa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OW255_11335 (rimO)
Ribosome biogenesis [BR:
lxa03009
]
Prokaryotic type
ribosomal protein modification factors
OW255_11335 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
WAJ22176
LinkDB
All DBs
Position
complement(2395176..2396516)
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AA seq
446 aa
AA seq
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MKLLCVSLGCDKNLVDTEMMLGLLNKDGYTFTDDEYEADVIVVNTCCFIGDAKEESINTI
LEMAQRKVDAKCKALIVTGCLAQRYKQEIIDEIPEVDGILGTSTYDEISNVLREALSGVE
HVQRFHDLDGIPEVETGRVLTTGGHYAFLKIAEGCDKHCTYCIIPTLRGNYRSVPMERLL
KEAQELAEKGVKELILVAQETTLYGVDLYGKKSLPELLKKLCRISGIQWIRIQYCYPEEI
TDELIQTMKEEAKICHYLDLPIQHASDRILKRMGRRTTQDQLRGIVEKLRKEIPDIALRT
TLISGFPGETEEDHEELMGFVDEMEFERLGVFAYSAEEDTPAAGFPDHVDQEVKEDRRDE
IMELQQEISLEHSESMIGKTVEVMIEGKVADENAYVGRTYMDGPGVDGMIFVQTGVELMS
GDFARVRVTGAMEYDLMGELEDEFTE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattatgtgtttcactgggctgtgacaagaatctggttgatacggagatgatg
ctgggccttttaaataaagacggatatacctttacggatgatgaatatgaggcagatgtt
attgtagttaacacctgctgttttatcggagatgcaaaggaggaaagcatcaataccata
ctggagatggctcaaagaaaggtagacgcaaaatgcaaggcacttattgtaacaggttgt
cttgctcagcgatataagcaggagatcattgatgagattccggaagtagatggaattctt
ggaacctccacctatgacgaaatttccaatgtgttaagggaagctttaagcggcgtagaa
cacgtgcagcgtttccacgatttagacggaattccagaggtggagactggacgagttctt
accaccggaggtcattatgcattccttaaaattgcggaaggctgtgataagcactgtact
tactgtattatccctacccttcgtggaaactaccgcagcgttcctatggagagactttta
aaggaagctcaagaactggctgaaaaaggagtaaaagagcttattttagttgcacaggaa
accacactttacggcgtggacctctatggcaaaaagtctcttcctgaactgctgaagaaa
ctttgccgtatctcaggcattcagtggatcagaattcagtattgctatccagaggaaatt
acagatgagctgattcagaccatgaaggaagaagcgaagatctgccattatcttgacctg
ccgattcagcatgccagtgatcgtattttaaagcgcatgggacgaagaacgactcaggat
cagcttcgtggaattgtggaaaagcttagaaaagaaatcccggacattgcccttcgaacc
acacttatttctggtttccctggtgaaacagaagaagaccatgaagaactcatgggattt
gtagatgagatggagtttgaacgtcttggagtatttgcatattctgcagaagaagataca
ccagcggctggtttcccggatcacgtagatcaggaagtgaaagaagaccgccgtgatgaa
attatggagcttcagcaggaaatttcattagagcattcagagtctatgattggaaagacc
gttgaagttatgatcgagggtaaagtggcagatgaaaatgcttatgtgggacgtacttat
atggatggacctggtgtggatggtatgatatttgtccagaccggtgtagaactgatgtca
ggtgattttgccagggttcgggttaccggagctatggaatatgatttgatgggagagttg
gaagatgaatttaccgaataa
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