Lacrimispora xylanolytica: OW255_11400
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Entry
OW255_11400 CDS
T08662
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
Organism
lxa
Lacrimispora xylanolytica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
UPF0160
Motif
Other DBs
NCBI-ProteinID:
WAJ22189
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Position
complement(2408797..2412357)
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AA seq
1186 aa
AA seq
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MYLKSIEIQGFKSFANKIVFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQKVKQLRSSS
MQDVIFSGTEQRKPQGFAYVAITLDNSDKHLAIDYDQVTVSRRVYRSGESEYMINGSACR
LKDIYELFYDTGIGKEGYSIIGQGQIDKILSGKPEERRELFDEAAGIVKFKRRKAIAQKK
LEDEKQNLVRVNDILTELEKQVGPLARQSEAAKEYLRLKEELKKYDVNQFLMETEGLRLQ
MKESEDKENIVAKDLEDAKTISEGIKEQYDALDTYLTELDEAITALRNEKNSSNMEISGL
EGRINVLKEQINTERMNAEHIAGRIKTIHTEIASRQEQEVSYQQARADIASQVNSALEKL
KEAEGILTAEDEKIRTFEQKLEEGKGRMMDLLNDKGSLTARQQRYEAMLEQVNVRRSEVC
QKLLKFKSDESEQDELLLNLKKEADEIDEGISQRDEAQSLCESRTEELEAQVKRLNKNLN
DKQQEYHTSYTKLESLRNLAERYEGYGGSIRKVMEVRGRIKGIHGVVADLITVPKQYEIA
VETALGGSIQNIVTDSDQTAKQLIEYLKKNRFGRATFLPLTNISNKNSFSQEKALSEPGV
LGLANTLVEADKQYEGLMNYLLGRVVVVDTIDNAIALAKKFQYSLRIVTLEGELLSAGGS
MTGGAFKNTSNLLGRKREIEELEERCTKALTDVEQLEKELVMNEGLLTESKEELDRIRSE
KQSLYLKQNTVRINLKRIEDKKTEIRESYGDLERENVQLEAQIREIGGSQQELLTAVETL
EKQNRDTGEELELLNSGLEKAKSDREQFYRNLSAVQLETSGLKQKDDFEQENIKRIKDEI
RRLEEELSGLTNGSDDSQLIVGEKEKEIELLKDQIHKEKSRGEELEQSIADKAGKKELKS
KEQKELFRTREELTGRIGLLDKELFRLQSQKEKLNERMEGHVNYMWNEYELTFSSAEALR
NHEWTSLPDIKRMIASLKDEIRKLGNVNVNAIEDYKEVSERYEFMKTQHDDLVLAEGTLL
KIIDELDSGMRKQFEEKFREIRAEFDKVFKELFGGGRGTLELVEDEDILEAGIQIISQPP
GKKLQNMMQLSGGEKALTAIALLFAIQNLKPSPFCLLDEIEAALDDSNVDRFAKYLHKLT
KYTQFIVITHRRGTMVSADRLFGITMQEKGVSTLVSVNLIEEDLES
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaaaaagtattgagatacagggctttaagtcatttgccaataaaatcgtattt
gatttccataatggaattaccggcattgtggggcctaatgggagcggaaaaagcaatgtt
gctgatgcggtgcgttgggtacttggagagcagaaggtaaagcagcttcgaagctccagc
atgcaggacgtaatcttttcaggaaccgaacagcgtaagcctcaggggtttgcttatgtt
gccattaccctggataattcagacaagcatcttgccattgattatgatcaggtaaccgta
tccagaagagtttatcgttctggtgaaagcgagtatatgatcaacggcagtgcctgccgt
ttaaaagatatctacgaactgttttatgatactggaatcggcaaagaggggtattccatt
atcggacagggtcagattgataaaatcctaagcggaaaaccagaggaacgccgggaattg
ttcgatgaagcggctggtattgttaaattcaagcgccgtaaggcaatcgcacagaaaaag
ctggaagatgagaaacaaaacctggtccgtgtcaatgatattctgacggagctggaaaag
caggttggtccacttgccagacaatccgaagcagcaaaagaatacctccgactgaaagag
gaattaaaaaaatacgatgtaaaccagttcttaatggagactgaaggactcagacttcag
atgaaagagagtgaagataaggaaaacattgtagccaaagatttggaagatgcaaagacg
atttccgagggaatcaaagaacaatacgatgcccttgatacatacttaacggaactggac
gaagccattactgccctgcggaatgaaaaaaacagttccaatatggagatcagcggtctg
gaaggccgaattaacgtattgaaggagcagattaatacggagcgtatgaatgcagaacat
attgcaggccgtattaaaaccatccatacggagatcgcttccaggcaggaacaggaggtt
tcttaccagcaggcgcgtgcagatattgccagccaggtaaactcagctctggagaaacta
aaggaagcggaagggattcttactgcagaggatgaaaagatccgcacctttgagcaaaag
ctggaggaaggcaaaggccgtatgatggatcttttaaatgacaaaggatccctaacagct
agacagcagcggtatgaagccatgcttgagcaggtgaatgtccgccgttccgaagtatgt
cagaagcttttaaaatttaaaagtgatgaatccgagcaggatgagctgcttttaaatctg
aaaaaagaagcagatgaaatcgatgaaggaatatcacagcgggatgaggcccagtctcta
tgcgaaagcagaaccgaggagctggaagcccaggtgaaacggctgaataagaacttaaac
gacaaacagcaggagtatcataccagctatacgaagcttgagtccttaagaaaccttgca
gaacggtatgaaggttatggcggaagcatccgtaaggtaatggaagtcagaggccggatt
aagggcattcatggcgttgtagcagatttaattacagtgccgaaacagtatgaaattgcc
gttgagaccgctctgggaggaagcatccaaaatattgttacagattcagaccagactgcc
aagcagctgattgaatatttaaaaaagaaccggtttggacgggctacttttttacctctt
acaaacatatcaaataagaattccttttcccaggaaaaggccctttcggaaccaggtgtt
cttggccttgccaataccctggtagaagcagacaagcagtacgaaggcctgatgaattat
cttctgggccgcgtcgttgtggtagataccattgacaatgccattgcccttgctaagaaa
ttccagtactcccttcggatcgttaccctggaaggtgaacttttaagtgcaggcggttcc
atgaccggtggtgcatttaaaaacacaagtaatcttcttggccggaaaagagagatcgaa
gaactggaagaacgctgtacgaaagctcttaccgatgtagaacaactggaaaaagaactg
gtgatgaatgaaggtcttttaacggaaagcaaggaagagcttgaccgaatccggagtgaa
aagcagagtctttatttaaagcagaataccgttcgtatcaatcttaagagaatcgaagat
aaaaagacggaaatccgggaatcctacggagatctggaacgggagaatgttcagctggag
gcacagatccgggaaataggaggaagtcagcaagagcttcttaccgcagtggaaactctg
gaaaagcagaaccgggataccggtgaggaactggagctgttaaattccggtctggaaaag
gcgaagtcggacagagagcagttttatagaaatttatctgccgtacagcttgagacctca
ggtttaaaacaaaaggatgattttgaacaggagaatataaagcgtatcaaagatgagata
cggcgactggaagaagaactttcagggcttacaaacggttccgatgattcacagctcatt
gtaggggaaaaggaaaaagaaattgagcttttaaaggaccagatccataaagaaaagtcc
cgtggggaagaattggaacagtcgatagcggataaggcaggtaaaaaggagttaaagtca
aaggagcagaaagaactgtttcggaccagggaagagctcaccggccgtatcggtcttttg
gataaagaattattccgtctacaaagccagaaagaaaagctgaatgaacgaatggaaggc
cacgtaaactatatgtggaacgaatatgaactgaccttctcatccgctgaggcattgagg
aatcatgagtggacatcacttcccgacattaagcggatgattgcatcgttaaaggatgag
attcgaaagcttggtaatgtaaatgtcaatgccattgaagattacaaggaagtttcagaa
cgatatgagtttatgaagactcagcatgatgatcttgttttagcagagggaactctgtta
aagatcatagatgagctggattctggaatgagaaagcagtttgaggaaaaattccgggaa
attcgggcagaatttgataaggtatttaaagagctgttcggaggaggacgcggaacctta
gagctggtggaagatgaagacatcctggaagcaggaatccagattatctcccagccgcca
ggaaaaaagcttcagaatatgatgcagctttctggtggagaaaaggcactgactgccatt
gccttactgtttgccattcagaacttaaagccatccccattctgccttttggatgagatt
gaggcggcactggatgattctaacgtagaccgttttgcaaaatacctccataagctgacg
aaatatacgcagttcattgtaattacacatagacgtggtactatggtatctgcggaccgc
ctgtttggtattaccatgcaggagaaaggcgtttcaacgcttgtatcagtaaatctgatc
gaggaagatctagaaagttaa
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