Lacrimispora xylanolytica: OW255_11715
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Entry
OW255_11715 CDS
T08662
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lxa
Lacrimispora xylanolytica
Brite
KEGG Orthology (KO) [BR:
lxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxa03032
]
OW255_11715
03400 DNA repair and recombination proteins [BR:
lxa03400
]
OW255_11715
Enzymes [BR:
lxa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OW255_11715
DNA replication proteins [BR:
lxa03032
]
Prokaryotic type
DNA Topoisomerases
OW255_11715
DNA repair and recombination proteins [BR:
lxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OW255_11715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF2018
Motif
Other DBs
NCBI-ProteinID:
WAJ22249
LinkDB
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Position
complement(2475548..2477782)
Genome browser
AA seq
744 aa
AA seq
DB search
MAEKIIRTEYSEEMQKSYMNYSMSVITARAIPDARDGLKPVQRRVLYDMSELRLNHDKPH
RKSARIVGDTMGKYHPHGDSSIYETLVVMSQIFKKGMPLVNGHGNFGSIEGDGAAAMRYT
EARLEKFAEEVYLKDLDKTVNFVPNYDETEKEPEVLPVRVPNLLINGAEGIAVGMSTSIP
SHNLGEVIDAVMAYIDNSDISIQELMEYMPGPDFPTGGIIANKSDLPAIYETGVGKIKLR
GRIEVELGKRKADKDKLLITEIPYTMIGAGINKFLVDIVDLVESKKLTDVVDISNQSNKD
GIRIVLELRKDADVEKIRNILYKKTKLEDTFGVNMLAIAGGRPETLNLKGILKNFLDFQY
ENATKKYQALLDKELEKKEIKEGLIKACDIIDLIIAVLRGSKNLKDAKNCLMTGDVSNIK
FRVSGFEEDAKKLCFTEKQASAILEMRLYKLIGLEILQLEKEFKETLEKIALYEKILSSR
KNMDEVIKDDLKAIKEEYATPRRTVIEDGKEAVYDESAIAVSEVTFVMDRFGYCKILEKN
TYDRNKETIETESQYVVNCFNTDKICIFTNTGNLHQVKVLDIPAGKLRDKGTPIENLSKF
DGTREQIIYLCHAEGLKGHKFLFATKQALIKLVPGEEFETNNRMVAATKLQDDDSVISIQ
LLNEQQDVVLQTSAGIFLRFRVEEISEMKKNARGVRGIKLSQGEELEAVYLLGEDPVIRY
KEKEVHLNRLKAGKRDGKGSKVRL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaagataattagaacagagtattccgaggaaatgcagaaaagctacatgaat
tactccatgagtgtaatcacagccagagcaatcccggatgcaagagatggattaaagccg
gtacaacggcgtgttttatatgatatgagcgagttgcgtctaaaccacgataagccacac
agaaaatcggcgcgtatcgtaggtgataccatgggtaaataccatccccatggtgacagc
tccatttatgagactctggtagtgatgtcccagatatttaaaaaagggatgcctttggtc
aatggacatggaaactttggttccattgaaggggatggcgcagcggcgatgcgttatacg
gaagccagacttgagaaatttgctgaggaagtttatttaaaggatttagataaaacggtt
aattttgttcctaactatgatgagacggaaaaggagccggaagtacttccggtaagagtg
cctaatcttttaattaacggtgccgaaggtattgccgttggaatgagcaccagcatccct
tcgcacaacctgggagaagtcattgatgctgtcatggcttacattgataattcagacatt
tccattcaggagctgatggaatatatgccagggccagattttccgactgggggtattatt
gcaaataaaagcgatctgcctgccatttatgaaaccggtgtaggtaaaatcaagcttcgc
ggccgcattgaagtggagcttggaaaaagaaaggcagataaggacaagctgctgattact
gaaattccatataccatgataggtgcgggaattaataaattcctggttgatatcgtagac
cttgtggaaagcaaaaagcttacagatgtagtggatatctccaatcagtccaataaagac
gggatccgtatcgttctcgaacttcgtaaggatgctgatgtagagaaaatccgcaacata
ttatataagaaaacaaagctggaagacacctttggagttaatatgctggccatagctggc
ggcagaccggaaactctgaatttaaaagggatattaaagaatttcctggacttccagtat
gaaaatgccacgaagaaataccaggcactgttagacaaggagctggagaaaaaagaaatc
aaggaaggtcttattaaggcctgtgatatcattgaccttatcattgcagttttaagaggt
tccaagaacctaaaggatgcaaaaaactgccttatgaccggagatgtgtccaatattaaa
ttccgggtcagtggatttgaagaagatgcgaaaaagctttgctttacggaaaagcaggcc
agtgctattttggaaatgcgtctttataagctgatcggactggagattcttcagttggag
aaggaatttaaggaaactcttgaaaaaattgctttatatgaaaaaattctttccagcaga
aaaaatatggatgaagtaatcaaagatgatttaaaagccattaaggaagagtatgcgact
ccaagaagaactgtgattgaggacggcaaggaagcggtttacgacgaatctgccatcgct
gtttcagaagtgacctttgttatggaccggtttggctattgcaaaatattagaaaagaat
acctatgacaggaataaagaaaccattgaaaccgagagtcagtatgtggtaaactgtttc
aatacggataagatctgtattttcaccaacacaggaaacttacatcaggtgaaagttctt
gatataccggctggaaagctgagggataaaggaactcccattgagaatctaagcaagttt
gacgggacaagggaacaaatcatatacttatgtcatgcggaaggattaaaagggcacaaa
ttcctgtttgcaacgaaacaggctcttattaagctggttccgggagaagagtttgagacc
aataatcgaatggtggctgcaacaaagcttcaggacgacgattccgttatcagcattcag
ctgttaaatgaacagcaggatgtggtgctccagacatcagcaggaattttcctgcgcttc
cgtgtggaagaaatatctgagatgaaaaagaatgccaggggtgtccgggggattaagctg
tctcagggagaggaactggaagctgtttatcttctgggagaagatccagtgattcgttac
aaagaaaaagaggttcacttaaaccggctgaaagcaggtaagcgagatggaaaaggcagc
aaagttcgcctttag
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