Lacrimispora xylanolytica: OW255_11810
Help
Entry
OW255_11810 CDS
T08662
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lxa
Lacrimispora xylanolytica
Pathway
lxa03030
DNA replication
lxa03430
Mismatch repair
lxa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OW255_11810
03430 Mismatch repair
OW255_11810
03440 Homologous recombination
OW255_11810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxa03032
]
OW255_11810
03400 DNA repair and recombination proteins [BR:
lxa03400
]
OW255_11810
Enzymes [BR:
lxa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OW255_11810
DNA replication proteins [BR:
lxa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OW255_11810
DNA repair and recombination proteins [BR:
lxa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OW255_11810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
DEDDh_C
7TM_transglut
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WAJ22263
LinkDB
All DBs
Position
complement(2491683..2496227)
Genome browser
AA seq
1514 aa
AA seq
DB search
MAKKFLDVFPNLHITEELRELLNLVEVEKVTSTRDRSSIRVYLMSQRLIHKQNIYGLEKG
IKEQLFPSKQLSVKIIERFKLSEQYTPQKLLKAYRDSLLMELKNYSIIEYNMFRKAKFDF
PKQDLLTLTVEDTIVSREKAGELKRVLEKIFFERCGLPVEVQYEYVAPKVNELAKQKELQ
MQREVEEIVSRTSLASVRMSEGMDEAPPSMADGGNLEAMANAYMQEVPFQQDGQTPALRM
GGNKEGGKTGGAESNKKDTAKKEWKDYKKSGNSYVKRSDNPDVLYGRDFEGEIIEIEKID
GEIGEITIRGKILNVDSRELRSGKTIMIFDVTDFTDTLTVKMFAKEEQLEDLNAAVVKGS
FIRIKGVTTIDKFDGELTLGSVVGIKKSEDFTGKRSDNSLQKRVELHCHTKMSDMDGVSE
VKDIVKRAKKWGMPAIAITDHGCVQSFPDANHALDKGDDFKIIYGVEGYLVDDLKELVGN
SRNQRLSDTYVVFDIETTGFSSSKNRIIEIGAVKVQDGVVIDRYSSFVNPEVPIPFEIEK
LTGINDNMVLPYPKIDEILPQFLEFCSDSVLVAHNASFDISFIAYNANRLGIEFSPTVID
TVALARLLLPSLNRYKLDTVAKALNISLQNHHRAVDDAGCTALIFVAFVKMLRDRGVEDL
DSLNQLSTMTADMIKKLPTHHVIILAANDVGRVNLYRLISRSHIDFYARRPRIPKSVLNE
NREGLIIGSACEAGELYQALLRGASDADITKLVNYYDYLEIQPLGNNGFMLRDEKSVVKT
EQDLIDINKKIVSLGEQFGKPVCATCDVHFLDPEDEVYRRIIMAGQGFKDSDEQAPLYLR
TTEEMLKEFEYLGPNKAEEVVIKNTRKIADMCEKISPVRPDKCAPVIENSDEDLRTICYD
KAHAIYGENLPTIVTERLERELNSIISNGFAVMYIIAQKLVWKSNEDGYLVGSRGSVGSS
FVAYMSGITEVNSLSPHYYCTECHYYDFDSEEVKKFSGMAGCDMPDKVCPVCGHPLEKDG
FDIPFETFLGFKGDKEPDIDLNFSGEYQSKAHDYTEVIFGKGQTYRAGTIGTLADKTAFG
YVKNYYEEHGVRKRNCEINRIVQGCVGVRRTTGQHPGGIIVLPHGEEIYSFTPVQRPAND
MTTMTVTTHFDYHSIDHNLLKLDILGHDDPTMIRMLQDLIGFDPVKDIPLDSPEVMSLFQ
DTSALGILPEDIGGCKLGALGVPEFGTDFAMQMLIDTKPKYFSDLVRIAGLAHGTDVWLG
NAQALIQEGKATIQTAICTRDDIMIYLISMGIEEGLSFSIMESVRKGKGLKPDWETEMIA
HGVPDWYIWSCKKIKYMFPKAHAAAYVMMAWRIAYCKVFYPLAYYASFFSIRANGFSYEL
MCQGRDKLEHFLADYRKRMDTLSKKELDTLRDMRIVQEMYARGYEFMPIDIYRAKARHFQ
IIDGKLMPSLSSIDGLGEKAADAVVDAVKDGKFLSREDFRNRTKVSKTVCDLMGDLGLLG
ELPESNQLSLFDLA
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaatttttggatgtatttccaaatttacatatcacagaagaactgcgagag
cttttaaacctggtggaagtggaaaaggtcacttccaccagggatagaagctctattcgt
gtttatctgatgagtcagagattgatacacaagcagaatatttatggcttggaaaaggga
ataaaagaacagctttttccgtcaaagcagcttagtgtgaaaattattgaacggtttaag
ctttcggagcaatatacgccacaaaagcttttaaaggcttatcgggacagccttttaatg
gaactgaaaaattacagtattattgaatataacatgttccgaaaagcaaaatttgatttt
cccaaacaagatcttttaacgttgactgtggaagataccattgtttccagggaaaaggca
ggggaactgaaacgagttctggaaaaaatatttttcgagcgatgcggcctgccggtagag
gtgcagtatgaatatgtagctcctaaagtcaatgaactggcaaagcaaaaagaattacag
atgcagcgtgaggtggaagagattgtaagccgtacgtctctcgcatctgtgcgtatgtca
gagggcatggatgaagcccctccttccatggcggatggggggaatcttgaggctatggcc
aatgcatatatgcaggaagtacctttccaacaggatggacagactccagcgcttcgtatg
ggtggtaacaaggaaggcggaaaaaccggcggagctgaatcaaataaaaaagatacagct
aagaaggaatggaaggactataagaagagcggaaactcttatgtaaaaaggtccgacaac
ccggatgtactctatggccgtgattttgaaggcgaaatcattgaaatcgagaagattgat
ggtgaaatcggtgaaataaccatacgtggaaagattttaaacgtagacagcagagagtta
cgtagtggtaaaaccattatgatctttgatgtgactgattttacagatacccttacggta
aagatgtttgcgaaggaagagcagctggaagacctgaatgctgcagtggtgaaaggaagc
tttatccggattaaaggtgtcacaaccattgataaatttgatggtgagctcacccttggt
tctgttgtgggaattaagaaatcagaagattttaccggaaaaagaagcgacaacagcctg
caaaagagagtggaacttcattgtcatacaaagatgagcgatatggatggagtatccgaa
gtaaaagatattgtgaaacgtgcgaaaaagtggggaatgcctgccatcgcaatcacggac
cacggatgtgtccaatccttcccggacgccaaccatgccctggataagggagatgacttt
aaaataatctatggagtggaaggatacctggtggatgacctaaaggagcttgtgggaaat
tccagaaaccaaaggttatctgatacttatgttgtatttgatattgagaccaccggattc
agttcttcaaaaaaccggattatagaaatcggtgcagtcaaagtacaggatggtgtggtg
attgaccgttatagttcttttgttaatccagaagtacccattccatttgaaatagagaag
ctgacgggaatcaatgacaatatggttcttccatatccaaagattgatgaaattctccca
cagtttctggaattttgttcggattcagtgctggtggctcacaatgcttcttttgatatc
agttttattgcttacaatgccaatcgtcttggaattgagttcagtcccacggtgattgat
accgtggccctggcaaggcttctgttgccaagtcttaaccgctacaagctggataccgtt
gcaaaggctctcaatatctctttacagaatcatcaccgtgcggtggatgatgcaggctgt
acggcacttatatttgtggcatttgtaaagatgcttagagaccggggcgtggaagatttg
gatagccttaaccagttaagcaccatgacggcagatatgattaagaagcttcctactcac
cacgtaattatcctggctgccaatgatgtgggccgggtgaacttataccggctcatttcc
aggtcacatattgatttttatgccagaaggcctagaattcccaaaagtgttctgaatgaa
aacagggaaggactgatcataggttccgcctgcgaagccggtgagctgtatcaggcactt
ttacgaggcgcatctgacgctgatattacaaagcttgtgaattattacgattacctggaa
atacagcccctaggcaacaatggttttatgcttagggatgaaaaaagcgtggtaaaaaca
gagcaggacttaattgatattaataaaaaaatcgtatctctgggggaacagtttggaaag
ccggtctgtgctacctgcgatgtacattttcttgaccccgaggatgaggtttaccgaaga
atcatcatggcaggccagggctttaaggattctgatgaacaggcgcccctgtatttacgg
acaacagaagagatgcttaaggaatttgagtatcttggtcccaataaagcagaagaggta
gtcattaaaaacaccagaaaaatcgctgacatgtgcgaaaagatctctccggtccgcccg
gataaatgcgctcctgtaatcgaaaactctgatgaagatttaagaacgatctgttatgat
aaggcacatgccatttatggggaaaatctccctacaatcgttacagagcgtctggagcga
gaactgaactccattatatccaatggatttgcagtaatgtacattatcgcccagaagctg
gtttggaaatccaatgaggacgggtatctggttggatcccgtgggtctgtaggttcctcc
tttgtggcctatatgtcaggtattacagaggtaaattctctaagtccgcattactattgt
acagaatgccattattatgatttcgattcagaagaagtaaaaaaattctccggtatggca
ggatgtgatatgcctgataaggtgtgtcctgtttgtgggcaccctttggaaaaggacgga
tttgatattccttttgagacattccttggatttaaaggagataaggaaccggatatcgat
cttaatttctccggagaatatcaaagtaaggcccatgactataccgaagtgattttcgga
aaagggcagacctaccgtgcgggtaccattggtacgctggcggataaaaccgcctttgga
tatgtgaaaaattattatgaagagcatggcgtaagaaaacgtaactgtgagattaaccgg
atcgttcaggggtgcgtaggggtcagaaggacgacagggcagcatccaggcggtattatt
gtattgcctcatggagaggagatttattcctttacgccggtgcagcgtcctgccaatgat
atgacgactatgacggtgaccactcattttgactaccattccattgaccacaatctgtta
aaactcgatatactgggacacgacgatcctaccatgatacgaatgctccaggatttaatc
ggttttgatccggttaaggatattccccttgacagtccagaggtcatgtccctgtttcag
gatacttcagcccttggaattttgccggaagatatcggtggctgtaagcttggagctttg
ggtgtacctgagttcggtacggatttcgccatgcagatgttaattgatacaaagccaaaa
tatttctccgatctggtccgtatcgcaggacttgcccatggtactgatgtttggcttggg
aatgctcaggctctcattcaggaagggaaggcgaccattcagactgctatctgtacccga
gatgatattatgatctatcttatttctatggggatagaagaaggactctctttctccatt
atggagagcgttcgtaaggggaaaggcttaaagcctgactgggaaacagagatgatagcc
cacggagtacccgactggtacatatggtcctgtaaaaagatcaaatatatgttcccaaag
gcacatgcggcggcctatgtaatgatggcgtggcgtattgcctactgtaaagtgttttat
cctcttgcttactatgcttcctttttcagcattcgtgccaatggcttcagctatgagctg
atgtgtcagggaagagataaactggagcatttcctggcagattatagaaagagaatggat
accctgtcaaagaaagagctggataccctgagggatatgagaatcgttcaggagatgtat
gccaggggctatgagtttatgcccattgatatttaccgggcgaaagccagacacttccag
attattgacggaaagctgatgccatccttaagcagtattgacggattgggagagaaggct
gccgatgcagtggtggatgccgtcaaggatggtaaattcctgtcacgggaagatttcaga
aaccgtacaaaggtcagcaagaccgtatgtgacctcatgggagacttaggccttttaggg
gaacttccggaatcaaaccagctttctttattcgatttggcataa
DBGET
integrated database retrieval system
