Lacrimispora xylanolytica: OW255_11895
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Entry
OW255_11895 CDS
T08662
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lxa
Lacrimispora xylanolytica
Brite
KEGG Orthology (KO) [BR:
lxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxa03032
]
OW255_11895 (topA)
03400 DNA repair and recombination proteins [BR:
lxa03400
]
OW255_11895 (topA)
Enzymes [BR:
lxa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OW255_11895 (topA)
DNA replication proteins [BR:
lxa03032
]
Prokaryotic type
DNA Topoisomerases
OW255_11895 (topA)
DNA repair and recombination proteins [BR:
lxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OW255_11895 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_3
Toprim_4
HVO_2753_ZBP
zf-tcix
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
WAJ22279
LinkDB
All DBs
Position
complement(2513377..2515446)
Genome browser
AA seq
689 aa
AA seq
DB search
MANCLVIVESPAKVKTIKKFLGTNYEVDASNGHVRDLPKSQMGIDVENDFDPKYITIRGK
GDILAKLRKEVKKADKIYLATDPDREGEAISWHLLKALKLDELKEKQVFRISFNEITKNA
VKASLKTPRAIDMNLVDAQQARRVLDRMVGYMISPLLWAKVKRGLSAGRVQSVALRLICD
REEEINAFIPEEYWNLDAQLKQDGSKKMLTAKFYGDKSGKLPIRNKKELDVILKGLENQT
YEVEEVKNGERVKKAPIPFTTSTLQQEASKVLNFSTQKTMRLAQQLYEGVEIAGHGTVGL
ITYLRTDSTRIAEEADTAAREYIEKQYGSQYVAQGEQSKKTNAKIQDAHEAIRPTDIALT
PVMVKESLQRDLFRLYQLIWKRFAASRMQPAVYQTTSVKVGAGEYLFTLSASKLSFDGFM
SVYVQEDDKEDANVLLGNLEKGSILKLENLEHGQHFTQPPAHFTEASLVKAMEEQGIGRP
STYAPTITTIIARRYVAKENKNLYVTELGEVVNSMMKQSFPSIVDITFTANLEYLLDKVG
DGSVQWKTVVKNFYPDLKEAVDKALVELESVTIADEVTEEICELCGRNMVIKYGPHGKFL
ACPGFPECKNTKPYLEKVGVPCPKCGKEVVIKKTKKGRVFYGCEANPDCDFMSWQKPSTQ
KCPKCGAYMVEKGNKLLCSNEQCGFSTDK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactgtttagtaattgtggagtcaccggcgaaagtaaaaacaataaaaaagttc
ttggggacgaactatgaagtggatgcatccaacggtcatgtaagagatctcccgaaaagt
cagatgggaattgacgttgagaatgattttgatccaaaatatataacaatcagaggaaaa
ggggatattctggcaaagctcaggaaggaagtaaagaaggcagataagatttatctggcg
actgaccctgaccgtgagggagaagcgatttcctggcatttattaaaggccttaaagctt
gatgagctgaaggaaaagcaggtatttcgaatcagctttaatgagattacaaagaatgca
gtaaaagcctccttaaagaccccaagagccattgatatgaatctggtggatgcccagcag
gccagaagagtccttgaccgtatggttggatatatgataagccccttattatgggcaaag
gttaagagaggcttaagtgccggtcgtgtacagtccgtggcactgcggctcatctgtgac
cgggaggaagaaatcaatgcatttattcccgaagagtattggaatctggatgcccagtta
aagcaggacggaagcaagaagatgctgactgcgaaattttacggcgataagagcggaaag
cttcccattcgtaataaaaaggaattggatgtgattcttaagggacttgagaatcagacc
tatgaagtggaagaggtaaagaatggagaaagagttaaaaaagctcccattccctttaca
accagtacgcttcagcaggaagcttccaaggtacttaatttttctactcaaaaaaccatg
cgtcttgcacagcagctttatgaaggtgttgagatagctggtcatggaaccgtaggtctt
attacttatcttcgaacagattctaccagaatcgcagaagaagcggatacagcagcaaga
gagtacattgaaaagcagtatggcagccagtatgtggcacagggagagcagagcaagaaa
acaaacgcaaagatccaggatgctcacgaggcaatccgtccaactgacattgcacttaca
ccagttatggtaaaggaatcgttgcagagagacttgttccggctttaccagctgatctgg
aagcgctttgcggccagccgtatgcagccggctgtttaccagacaacttctgtgaaagta
ggagccggagagtatttgtttacactttctgcatccaagctttcttttgatggattcatg
tctgtgtatgtacaggaagatgataaagaggatgccaatgtcttattagggaatctggaa
aagggaagtattttaaagcttgaaaatcttgagcatggacagcattttacccagccgcct
gcgcattttactgaggcttctttagtaaaggcaatggaagaacagggaataggccgtcca
agtacctatgcacctaccatcaccacaatcattgcgagacggtatgtggctaaggagaat
aagaatctttatgtaacagagttaggggaagttgttaatagtatgatgaagcaaagtttc
cccagtattgtagatattacattcaccgcgaatctggaatatctccttgataaagtggga
gatggttcggtccagtggaagacggttgtaaagaatttttatccggatttaaaggaagcg
gtagacaaagctcttgtggagctggaatctgtgaccattgcagatgaagtgacagaggaa
atttgtgagctgtgcggccgtaatatggtcatcaaatacggtcctcatggtaagttcctt
gcctgtcctggatttccggagtgtaagaacactaagccatatctggagaaggttggagtt
ccatgccctaaatgcggtaaggaagtcgtaatcaagaagacgaaaaaaggcagagtcttc
tatggctgtgaagccaatcccgattgtgatttcatgtcatggcaaaaaccttccacgcag
aaatgtccaaagtgtggagcttacatggttgaaaaaggaaataaattgctttgttccaat
gagcagtgtggatttagcacggataaatag
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