Lacrimispora xylanolytica: OW255_14370
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Entry
OW255_14370 CDS
T08662
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lxa
Lacrimispora xylanolytica
Pathway
lxa00220
Arginine biosynthesis
lxa00240
Pyrimidine metabolism
lxa00250
Alanine, aspartate and glutamate metabolism
lxa01100
Metabolic pathways
lxa01110
Biosynthesis of secondary metabolites
lxa01240
Biosynthesis of cofactors
Module
lxa_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
lxa00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
OW255_14370 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
OW255_14370 (carB)
00220 Arginine biosynthesis
OW255_14370 (carB)
Enzymes [BR:
lxa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
OW255_14370 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
GARS_A
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
Radical_SAM
DUF3182
Motif
Other DBs
NCBI-ProteinID:
WAJ22744
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Position
complement(3067943..3071146)
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AA seq
1067 aa
AA seq
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MPKIQDIKKVLVLGSGPIIIGQAAEFDYAGTQACRSLKEEGVEVVLLNSNPATIMTDKDI
ADKVYIEPLTVEVVEQLILKEQPDSVLPTLGGQAGLNLAMELEDSGFLKKHNVRLIGTTA
LTIKKAEDREMFKETMEKIGEPVAPSDIVENVEDGLRIAKEIGYPIVLRPAYTLGGSGGG
IAENPAQCREILENGLRLSRVGQVLVERCISGWKEVEYEVMRDGAGNVITVCNMENLDPV
GVHTGDSIVVAPSQTLGDKEYQMLRTSALKIISELGITGGCNVQYALHPDSFEYCVIEVN
PRVSRSSALASKATGYPIAKVAAKIALGYTLDEIKNAVTKKTYASFEPMLDYCVVKMPRL
PFDKFLSAKRTLGTQMKATGEVMSICTNFEGGLMKAIRSLEQHVDSLMSYDFTGLTDEEL
TETLHLVDDRRIWVIAEALRRGFSYESIHDITKIDVWFIDKLAILIEMEEALKKGPLTTE
LLKEAKRLEFPDTVISRLTGVSVEEIHDRRKENGITAAFKMVDTCAAEFAAETPYYYSCF
GSENEAIQTSGRKKVLVLGSGPIRIGQGIEFDYCSVHSTWSFSKEGYETIIVNNNPETVS
TDFDIADKLYFEPLTPEDVESIVDVEKPDGAVVQFGGQTAIKLTEALMKMGVPILGTAAE
DVDAAEDRELFDKILEECEIPRPAGHTVFTAEEAKEAANKLGYPVLVRPSYVLGGQGMQI
AISDQDVDEFIGIINQIAQEHPILVDKYIMGKEIEVDAVCDGEDILIPGIMEHIERAGVH
SGDSISVYPAQSIDHEVKEKLVEYTRRLARALHVKGMINIQFIVCGSDVYVIEVNPRSSR
TVPYISKVTGIPIVPLATQVICGHSIKELGYEPGLQPEADYIAVKMPVFSFEKIRGADIS
LGPEMKSTGECLGIAKTFNEALYKAFAGAGIKLPKYKNMIITVKDSDKEEIIEIARRFQA
QGYKIFSTSGTAKVLNDNGVKALMVRKLEQESPNLMDLILGHEIDLVIDTPPQGADRSKD
GFIIRRNAIETGVTVLTSLDTAQALVTSMENKAKELTLIDIAQVKNV
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagattcaggatattaaaaaagtactcgttctcggatccggtccgatcatcatc
ggtcaggcggcagaatttgattatgcaggaacacaggcctgccgttccttaaaagaagaa
ggggtagaagtagttttattaaactcaaaccctgcaaccatcatgacggataaggacatt
gcagacaaggtatacattgaaccccttactgtagaagtggtggagcagcttattttaaag
gaacagccagacagcgttctgccaacccttggcggacaggctggtttaaatcttgctatg
gagttagaagacagcggatttttaaaaaagcacaacgttcgtctcattggaacgactgcc
cttaccattaagaaggcagaagatcgtgagatgtttaaagagaccatggagaagatcggg
gaaccggtagctccttctgatatcgttgagaacgtagaagacggtttgagaattgccaaa
gagatcggatatcccatcgtactacgaccagcctacactctgggcggttccggcggcggt
attgccgagaatccggctcagtgccgtgagattttagaaaatggacttcgtttgagccga
gttggtcaggttcttgtagaacgctgtatctctggctggaaagaagtggaatatgaagta
atgcgtgacggcgctggaaacgtgattaccgtatgtaatatggaaaaccttgatccggtc
ggcgttcatactggtgacagcatcgttgtagctccttcccagaccctgggagataaggaa
taccagatgcttcgtacctctgccttaaagatcatcagcgagctggggattacaggcggc
tgtaacgtacagtatgccctccacccggacagctttgaatactgcgtgattgaggtaaat
cctcgtgtgagccgttcctctgctcttgcttccaaggcaactggataccccattgcaaag
gtagcagcaaagatcgcattaggctatactctggacgagatcaagaatgcagtaacgaaa
aaaacctacgcaagctttgagccaatgcttgactactgcgtggttaagatgccaagactt
ccttttgacaaattcttaagcgcaaagagaaccctggggactcagatgaaggcaaccggc
gaggtcatgagtatctgtaccaacttcgaaggcggcttaatgaaggccattcgttccttg
gagcagcatgtggacagccttatgtcttatgattttacaggtcttaccgatgaagaactg
acagagacccttcatcttgtagatgacagaagaatctgggtcattgcagaagcactgaga
agaggcttctcctatgagagcatacatgacattacaaaaattgatgtctggttcattgat
aagcttgccattctgatagagatggaagaggctctgaaaaaaggccctcttaccacagag
ctgttaaaagaagcaaagcgtctggagttcccggatacggtgatatcaagactgacagga
gtttctgtggaagaaattcatgacagaagaaaagaaaatggaatcacagcggcctttaag
atggtagatacctgtgcagctgagtttgcggctgaaaccccttattactactcctgcttt
ggaagtgagaatgaagccattcagacttccggaagaaaaaaggttcttgtccttggttcc
ggcccgattcgtatcggccagggaattgaattcgattactgttccgtacacagcacctgg
agcttcagcaaagaaggatatgagacaatcatcgtaaacaacaatccggaaaccgtaagt
acggactttgacattgcagataagctttattttgagcctctgactccggaagacgtggaa
agcattgttgatgtggaaaagccagacggagcagtggtacagttcggcggacagactgcc
attaaactgacagaagctcttatgaagatgggcgttcccattcttggaacggcagcagaa
gatgtagacgcagcagaggacagagagctgtttgataagatactggaagagtgtgagatc
ccaagaccagctggacataccgtatttacagcggaagaagcaaaggaagccgcgaacaag
ctgggttatccggtccttgtaagaccttcctatgtattaggcggccagggaatgcagatt
gcaatctctgatcaggatgtagacgaatttatcggaatcatcaaccagatcgctcaggaa
cacccgattctggtcgataaatatatcatgggaaaagagattgaagttgacgcagtctgc
gacggggaagatattctgataccaggaatcatggagcatattgagcgtgctggtgtccat
tccggagacagtatctcggtatatccggcccagagcattgaccatgaagtaaaggaaaag
ctggtagaatacaccagaaggcttgcaagagcccttcatgtaaaaggaatgatcaacatt
cagttcattgtctgcggaagcgacgtttacgtcattgaggtaaatccacgttcctcccgt
accgtaccgtacatcagtaaggtaactggaattccaattgtaccgcttgcaactcaggta
atctgcggacattccattaaggaacttggctatgagccaggtctccagcccgaagccgat
tacatcgcagtaaaaatgccggtattctcctttgaaaagatccgtggcgctgatatcagc
ctgggacctgagatgaaatccacaggtgaatgtcttggaattgcaaagacctttaacgaa
gcgctatacaaagcctttgcaggtgcaggcattaagcttccaaagtacaagaacatgatc
attaccgtaaaagattctgataaagaggaaatcatcgaaatcgccagaagatttcaggct
cagggctataagattttctccacctcaggcactgctaaggtgttaaatgacaacggggta
aaagcactaatggtacgtaagctggaacaggaatctccaaatctcatggatttaattctg
ggacatgaaattgaccttgtcattgatacaccgcctcagggcgctgacagaagcaaggac
ggtttcattatccgcagaaatgccattgagaccggcgttacggtcctgacctcattggat
acggcacaggccttagtgaccagtatggaaaacaaggctaaagaattgacactcattgat
attgcacaggtaaaaaatgtataa
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