Lacrimispora xylanolytica: OW255_15155
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Entry
OW255_15155 CDS
T08662
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lxa
Lacrimispora xylanolytica
Pathway
lxa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OW255_15155 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxa03400
]
OW255_15155 (uvrA)
DNA repair and recombination proteins [BR:
lxa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OW255_15155 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OW255_15155 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
nSTAND1
RsgA_GTPase
nSTAND3
AAA_23
NACHT
AAA_25
DnaJ_CXXCXGXG
cobW
Viral_helicase1
DUF7575
Motif
Other DBs
NCBI-ProteinID:
WAJ22894
LinkDB
All DBs
Position
complement(3232520..3235345)
Genome browser
AA seq
941 aa
AA seq
DB search
MAKQYIKIRGANEHNLKNVSVDIPRNELVVLTGLSGSGKSSLAFDTIYAEGQRRYMESLS
SYARQFLGQMEKPDVENIEGLSPAISIDQKSTNRNPRSTVGTVTEIYDYLRLLYARVGIP
HCPKCGREIRKQTVDQMVDQIMELPERTKIQLLAPVVRGRKGEHAKVLENSRKSGYVRVR
IDGNLYELSEEIKLDKNIKHNIEVVVDRLAIREGIEKRLTDSIETVMDLADGLMIVDVID
GNPINFSQSFSCPDCGISIDEVEPRSFSFNNPFGACPDCFGLGYKMEFDEDLMIPDKSLS
IDEGAITVLGWQSCTDKGSYTRAVLDALAKEYHFKLNTPFEDYPKEVHDILIHGTNGKEV
KVYYKGQRGEGIYDVAFEGLVQNVARRYRETYSESSKAEYETFMRITPCPACGGMRLKKE
SLAVTVGDKNIYEATNMSIVRFREFFDQMNLTPMQRAIGDQILKEIRARVSFLIDVGLDY
LTLSRATGTLSGGEAQRIRLATQIGSGLVGVAYILDEPSIGLHQRDNDKLLKTLLHLRDL
GNSVIVVEHDEDTMMAADYIVDIGPGAGEHGGNVVAVGTAKQIMKNKNSVTGAYLSGRIK
IPVPKERREPTGYLTVKGAQENNLKNIDVSFPLGVMTCVTGVSGSGKSSLVNEILYKALA
KKLNRARTVPGKHKSLEGVDQLDKIIAIDQSPIGRTPRSNPATYTGVFDLIRDLFASTPD
AKAKGYSKGRFSFNVKGGRCEACNGDGIIKIEMHFLPDVYVPCEVCNGKRYNRETLDVKY
KGKNIYDVLDMTVEEAVKFFENVPSISRKISTLNDVGLSYIRLGQPSTELSGGEAQRIKL
ATELSKRGTGKTIYILDEPTTGLHFADVHKLIEILRKLSEGGNTVVVIEHNLEVIKTADY
IIDIGPEGGDKGGTVIAKGTPEDVALCPDSYTGHYIKKYLE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacagtatattaagataagaggtgccaatgagcacaatttaaaaaacgtttcc
gtggatattccaaggaatgagctggtagttttaacgggcttaagcggttcgggaaaatct
tccctggcttttgataccatttatgcagagggacagagacgctatatggagtccctttct
tcttatgccagacagttcttgggccagatggaaaaaccggatgtggagaacattgaaggt
ctttcgccggccatttctattgaccagaagtctaccaaccgtaatccacgttccaccgta
ggtacggtaacggagatttatgattatttacgacttctttatgcaagagtaggaatccct
cattgtccgaagtgtggacgtgagattcggaaacagaccgtagatcagatggtagatcag
attatggagctgccagagagaacaaagattcagcttctggctccagtggtccgcggaaga
aaaggcgagcacgcaaaggtactggaaaactccagaaaaagcggttacgtcagagtccga
attgatggcaatctctatgagctgtctgaagaaatcaagctggacaagaacataaaacat
aacatagaagtcgtagtagatcgtctggctatccgggaaggcatagaaaagcgtctgacc
gattccattgagactgttatggacttggcagatggccttatgatcgtagacgtgatagat
gggaatccgattaatttcagtcagagcttttcctgcccggactgcggcatcagcattgac
gaagttgagccaagaagcttctcctttaataacccatttggagcctgcccggactgtttt
ggtcttggatataagatggagtttgacgaagatctgatgattccggacaagagccttagc
attgatgaaggagccattaccgttcttggctggcagtcctgtaccgataagggaagctat
acccgtgcggtcctggatgcgttggcaaaggagtatcattttaagctgaatactcccttt
gaggattatccaaaagaagtacatgacatcctgatccatggaaccaatggaaaggaagta
aaagtatattataagggacagcgaggagaaggcatctacgacgttgcctttgagggacta
gtacagaatgttgccagaagataccgggaaacctattctgagtcctccaaagctgagtat
gagacctttatgcgcatcaccccatgtccagcctgcggcggcatgagactgaaaaaagaa
tcacttgccgttacggtaggagataaaaatatttacgaagccaccaatatgtccatcgtc
cgcttccgtgagttctttgaccagatgaatctgactcctatgcagcgtgccattggtgat
cagatattaaaagaaatcagagcaagagtttccttcctcattgatgttggtcttgattat
ctgaccttaagccgtgctacaggaaccctgtccggcggagaggcccagagaatccgtctg
gcaacccagattggttccggactggttggcgttgcttatatcttagatgagccgagtatc
ggtcttcaccagagagataatgacaagctgttaaagacccttcttcatctgagagacctt
ggaaacagcgtaattgtggtagaacatgacgaagacaccatgatggcagccgattacatt
gtggatatcggtccaggtgccggagagcacggtggtaatgttgttgcagtaggaactgca
aagcagatcatgaagaataagaattcagtcaccggagcttatttaagcggtcgcattaag
attccagtacccaaagagcgcagagagccaaccggatatctgactgtaaagggagcacaa
gagaataatttaaaaaacattgatgtttctttccctcttggagtcatgacctgtgtcacc
ggtgtatcgggttccggtaagagttctcttgtcaatgagattctttacaaagctctggca
aagaaattaaaccgggcaagaactgttccaggaaagcataagtccctggagggcgtggat
cagcttgataaaatcatagccatcgatcagtccccaattggaagaacaccaagatctaac
ccagccacctatacaggtgtatttgacttgattcgtgacttatttgcctccacccctgat
gcaaaggcaaagggctattccaaaggccgtttcagctttaacgttaaaggcggacgctgt
gaagcatgtaatggtgatggtattatcaagatagagatgcactttcttcctgatgtctac
gtcccttgtgaagtatgtaatggaaagcgttacaaccgagagaccttagatgtgaaatat
aagggaaaaaacatttatgatgttcttgatatgaccgtagaagaagccgtaaagtttttt
gaaaatgtaccgtctatctcaagaaaaatatcaactctgaatgatgtaggactttcctat
atccgacttggacagccttccacagaattatcaggcggtgaagcccagagaattaaactg
gctacagaattaagcaagcgtggaacgggtaagaccatctacattttagacgagccaacc
acgggacttcattttgctgatgttcacaagctgattgagattttaagaaagctttcagag
ggcggcaatacggtagttgtcattgaacataatctggaggtcattaagactgcggactac
atcattgacattggccctgaaggaggagacaagggcggtaccgtcattgctaagggcaca
ccagaagacgtggcactttgtcctgattcctacaccggccattatataaagaaatattta
gaataa
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