Lacrimispora xylanolytica: OW255_17150
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Entry
OW255_17150 CDS
T08662
Name
(GenBank) helix-turn-helix transcriptional regulator
Organism
lxa
Lacrimispora xylanolytica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
WAJ23274
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Position
complement(3682832..3685018)
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AA seq
728 aa
AA seq
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MKNNVKYENRLFLQFLLLVTVPLIVMGIVSYYIYVKGENSKSGQALDSYCKSVANEYENV
FSSIREYYLDSTGSTSVKWLVNQKEVPYSKYKELKQAQNMLQGNYFLSKYVSFYNFMNVK
EGWVLNKYGMYPIKDLKNLSEVEAFLEEQKEIPLSLYWLNRMDTASPYEGTVKESGFVDT
AGELLVVKEEYSSVGTVYVLTVRLDTERLENLSEPYRKLGYDVTVLSNGKVLMETNPALT
KAYRASLEGGGVKSGTYASTGGKNFRLSVMESGGNGLTYITGVDTAKMNREGIPFVLASI
AIIGIFGVILIVLRVAAIAFSKPVLMLQKFVDDQNAQIRELFLSNLLKGELSMEKIQETM
KKYGMEAWSSYRLIAISCKFEEKNPPVTREERDEINREILMNLPEGVREAFFVSPVIHGH
MALFIIGENDDLEVDNKTALVYKQIKDHVMEIYGYPVAFGISRTFHKLTHTGRAYEECSE
ALHSKNHDRNENGSSLVLYDDYSLMDPAGNVYDMIMEDELIHSVDSLNEEEAKRLLELIM
GRMEMKGASGMERTFYITRLLTAVLDIPARASLSLTDLFGSDQYNVLTKASNVYGQKELV
SFIMEEILNPVMTALSEARAAGSSDIVKEVTRMIKDKNGNISLNECADALSYHPNYISRV
LKKEKGLSFTDMVNEEKLKIAKYMLLTSTDSIADISARLNYNNVQNFIRFFKNQVGTTPS
AYRKEHKE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaataatgtaaaatacgagaaccgcttgtttttgcagtttcttttgctggtgacg
gttcctttgattgttatgggaatcgtatcttactatatttatgttaagggggagaacagt
aagagcggacaggctcttgattcctactgcaaaagtgttgcaaacgaatatgaaaatgta
ttttcctccattcgggaatattacttagacagcaccggcagcacctcggtgaaatggctg
gtgaaccaaaaggaagtaccttattccaagtataaggaattaaagcaggcccaaaacatg
cttcagggaaattattttctctctaaatatgtgagcttttataacttcatgaatgtaaag
gagggctgggtcttaaacaaatatgggatgtatcccatcaaggatttaaaaaacttatca
gaggtagaagcttttttagaagaacaaaaggagatccctttgtccctttactggttaaac
cggatggatactgccagcccttatgagggtacggtaaaggaatcgggatttgtggacacg
gctggtgagcttcttgttgtaaaggaagagtacagcagtgtgggaacggtttatgtactg
acggtccgcttggatacggaacggctggaaaacctatccgagccttaccgaaagcttggc
tacgatgtgactgtacttagcaatggaaaagtgctgatggagacgaatccggctcttact
aaggcgtatcgtgcctccttagaaggaggaggggtgaaaagcggaacctatgcctctaca
ggggggaaaaactttcgtctaagcgtcatggaatccggaggaaatggtctgacctacatc
actggtgtggatacagcgaagatgaaccgggaaggaatcccctttgttctggcctccatt
gctatcattggtatttttggagtcattcttattgttttaagagttgcagccatcgccttt
tcaaagccggtcttaatgcttcagaagtttgtagatgaccagaatgcgcagatccgggag
cttttcttatccaatctgttaaagggtgagttaagcatggaaaagatacaggagaccatg
aaaaagtatggaatggaagcctggagctcttaccggctgatcgccatttcctgtaagttt
gaagaaaaaaaccccccggtgacaagggaagaaagagatgagatcaaccgggagatctta
atgaacctgccggaaggagtgagagaggcatttttcgtatccccagtcatccatgggcat
atggctctttttatcattggagaaaatgacgatcttgaggtggataataaaacggctctt
gtctacaagcagattaaggaccacgtgatggagatttacggttatccagtggcatttggc
atcagccgtacctttcataagctgactcatacaggcagagcctacgaggaatgctctgaa
gcgcttcacagcaagaaccatgaccgcaatgagaatggttcttctctggtcctttacgat
gattattctctcatggatccggctggcaatgtctacgatatgattatggaagatgaactg
atccactcggtggacagcttaaatgaggaagaggcaaaaaggcttttggagctgattatg
ggcagaatggagatgaaaggcgcctccggtatggagcggacgttctatattaccaggctg
cttacggctgtccttgatataccagccagagcctccctgtcccttacggatctctttgga
agtgaccagtataacgtgctgacaaaggcttctaatgtatacgggcagaaagagctggtc
tcatttataatggaagagatattgaatcctgtgatgacagccctttcagaggcgagagct
gctggctcttctgatattgttaaagaagtaacgagaatgatcaaagacaagaacggaaat
ataagcctgaatgaatgtgccgatgccttaagctatcatcccaattatatcagcagggtc
ttaaaaaaagaaaagggattgtcatttacagacatggtcaatgaagaaaagcttaaaata
gcaaagtatatgcttttgacttccacagactctatcgccgatatttcagccagattaaat
tataataacgtccagaattttatccgcttttttaaaaaccaggtggggacaaccccttcc
gcttaccggaaagagcataaagaatag
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