Lacrimispora xylanolytica: OW255_18030
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Entry
OW255_18030 CDS
T08662
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lxa
Lacrimispora xylanolytica
Pathway
lxa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lxa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OW255_18030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lxa03021
]
OW255_18030
03400 DNA repair and recombination proteins [BR:
lxa03400
]
OW255_18030
Enzymes [BR:
lxa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OW255_18030
Transcription machinery [BR:
lxa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OW255_18030
DNA repair and recombination proteins [BR:
lxa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OW255_18030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
RAD51D_N
PASTA
MukB
Motif
Other DBs
NCBI-ProteinID:
WAJ26062
UniProt:
A0ABY7AH23
LinkDB
All DBs
Position
complement(3891523..3892491)
Genome browser
AA seq
322 aa
AA seq
DB search
MFDFEKPNIEIAEISEDKKYGKFVVEPLERGYGTTLGNSLRRIMLSSLPGAAVSQVKIDG
VLHEFSSIPGVKEDVTEIIMNIKSLSIKNNSDTNEAKVAYIEFEGEGVVTAADIQADPDI
EIMNPDLVIATLSGGTDSKFYMELTITKGRGYVSADKNKSEDLPIGVIAVDSIYTPVERV
NMTVQNTRVGQVTDYDKLALDVFTNGTLAPDEAVSLAAKVLSEHLNLFIDLSENAKTAEV
MVEKEDNEKEKVLEMNIDELELSVRSYNCLKRAGINTVEELCNRTSEDMMKVRNLGRKSL
EEVLAKLKELGLQLNPSDDSNV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgattttgaaaaaccaaatattgagatcgctgagatctcagaagacaagaaatat
ggcaagtttgtagttgaaccgcttgaaagaggttatggcacgactttaggtaattcctta
agaaggatcatgctttcttccttaccgggagctgcagtcagtcaggtaaaaatcgacggc
gttttgcatgaattcagttctattcctggtgttaaagaggatgttactgagatcattatg
aacatcaagagcttatctattaagaataatagcgacaccaacgaagctaaggttgcatac
atcgagtttgaaggcgaaggtgttgtgactgctgctgacatccaggcagatcctgatatt
gagatcatgaacccggatttggttatcgctacacttagcggcggaacagacagcaagttc
tatatggagcttactatcacaaagggccgtggctatgtgagtgcagacaagaacaagagt
gaggatttaccgattggcgtaattgcagttgattctatttatacaccagtagaacgcgtt
aatatgacggtacagaacacccgagtaggtcaggtcactgactatgataagttggcatta
gatgtatttacaaacggtactttggcaccagatgaggctgtcagccttgcagctaaagta
ttaagcgagcatttaaatctgttcatcgatctttctgaaaacgctaagactgctgaagtc
atggtggagaaggaagacaatgaaaaagagaaagtgcttgagatgaacattgatgagctg
gagctttctgtccgttcatacaattgtcttaagagagctggaatcaataccgttgaagaa
ctgtgcaaccgcacatctgaggatatgatgaaggttcgtaaccttggccgcaagtcttta
gaagaagtgttagccaagttaaaggagttaggcttacagcttaacccaagcgatgattcc
aatgtataa
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