Lacrimispora xylanolytica: OW255_19030
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Entry
OW255_19030 CDS
T08662
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lxa
Lacrimispora xylanolytica
Brite
KEGG Orthology (KO) [BR:
lxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lxa03019
]
OW255_19030
Messenger RNA biogenesis [BR:
lxa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OW255_19030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
WAJ23622
LinkDB
All DBs
Position
complement(4128181..4129125)
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AA seq
314 aa
AA seq
DB search
MRYIESFREGMHVSDVYLCKNRQVCLTKSGKEYGNVILQDKTGTIDAKIWDLNSPGIGNF
ESMDYVFIDADVTVFQNSNQLNIKRARKAEEGEYVPGDYLPVSTKDIGLMYEELLGFIRS
LKNPYLKKLLESFFVEDAAFAKAFQFHSAAKSVHHGFVGGLLEHTLSVVKLCDYYAGYYP
LINRDLLLTAAMFHDVGKTKELSAFPENDYTDDGQLLGHIIIGTEMISERMKTIPGFPEK
TATELKHCILAHHGELEYGSPKKPAIIEALALNFADNTDAKMESMIEVLRGAGDNSGWLG
FNRLMDTNIRKTTE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagatatatagaatcattccgtgaagggatgcatgtttcagatgtgtatttatgtaaa
aacagacaggtttgcctgacaaaatcaggaaaagagtacggcaatgtgatccttcaggat
aagacaggcacgattgatgccaagatatgggatttgaattctcctggaatcggcaatttt
gaatccatggattacgttttcattgatgcagatgttaccgtattccagaattccaatcag
cttaacatcaaacgtgcccgcaaagcagaagaaggagaatatgtgcctggggattatctg
cctgtttccacgaaagacattggactcatgtatgaagagctccttggctttatcagatcc
ttaaagaatccttacttaaagaagctgttagaaagcttttttgtagaggatgctgcattt
gccaaggcatttcaattccattccgcagcgaaaagtgttcatcatgggtttgtaggagga
ctgttagagcataccttaagcgtagtaaagctgtgtgactactatgcaggatattatcct
cttatcaaccgggatctgcttttaactgcagccatgttccacgatgtgggcaagacaaag
gaactctctgcatttccggaaaatgattataccgacgacggacagcttttaggccacatc
atcatcggaaccgagatgatcagtgagagaatgaaaaccattcctggattcccggaaaag
actgcaactgagcttaagcactgcattttggcccaccatggggaactggaatacggctcg
ccgaaaaaaccggcgattatagaagcgcttgctcttaattttgcagataatacggatgca
aagatggaaagcatgatcgaagtgttaagaggggcaggagataacagtggctggcttggt
tttaaccgtctcatggacacaaatatcagaaagacgacagaataa
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