Luteimicrobium xylanilyticum: KDY119_00478
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Entry
KDY119_00478 CDS
T06254
Symbol
recC
Name
(GenBank) Exodeoxyribonuclease V
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lxl
Luteimicrobium xylanilyticum
Pathway
lxl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KDY119_00478 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxl03400
]
KDY119_00478 (recC)
Enzymes [BR:
lxl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KDY119_00478 (recC)
DNA repair and recombination proteins [BR:
lxl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KDY119_00478 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QFU96985
UniProt:
A0A5P9Q995
LinkDB
All DBs
Position
complement(536938..540525)
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AA seq
1195 aa
AA seq
DB search
MAGSGVHTSAVAATVRDMTTTAQPPALFEVPRTGRLFVHTSERADVLVGELAAVLAADPP
ADPFAAEVVAVPTRGVERWVAQRLSHRLGALGIGVGGEAGVCANVVFDSPSRVLHRVVAT
ASGIDPDADPWDRERLAWHVLRVVDAAVAAGEAWAAPLARFLTDPPGQAASDGVREARRM
RLAQRVAALFAAYGSQRPSLVTSWADGTDDDGAGGPLPPDLAWQPPLWRAVREAAGVPSP
AERLASATAVLRDDPDAVDLPARLSVFGPTRLPESELDVLDALGAHREVHLWLPHPSPAL
WRRATGGVDGDGPGGARPAPRRADVAVSARHPLLGSLGRDATELSLRLAARGVEARHHPA
PTPPETVLGALQASLRADERPDPGSRLVAPDDDRTIQVHACHGRSRQVEVLREAVVGLLA
DDPTLQPRDVVVLCPDVEAFAPLVNATFGATFDRDTTDDADPHPGRTLRVRIADRAPART
NPMLRVVSDLLTLAGSRVTASAVVDLAGLEAVRRRFGFDDDALERLRAWTLASGVRWGED
AARRSRFGVRVGQGTWAAAMDRLLLGVAMSDDDYRHLDATLPLDDVGSTEVDLAGRFAEL
VDRLTGLLAELEGTRPATAWFDTLDRALVLLADTAPADQWQRVEARGVLADARAAASTAA
SPDGGALLRLPDVVALLERRLAGRPTRAGFRTGALTVCSLEPMRAVPHRVVCLLGLDDTA
FPRVGAVSGDDALARDPLVGERDRRSEDRQLFLDAVLAATDHLVVVHSGADERTGRPLPP
AVPVGELLDSVDECVVFPGGPGGAPRDARAALVVHHPLQTVDERNFVPGALGRRGPFSFD
DLERRAAFVGRRERVGRRPLLDSPLSPVLDDDATVGLEGTTGLVPTLEHPAKAFVRGRLG
VSLPRDEDDLEDRLPLELDSLDGWAAGDRILAAVLDGGDLDVAASAERLRGRMPPGRLGS
AALQGITDNVAAVAAESAPFVRVPAATLDVTVSLPDGRTVTGTVPGIRRGGEHAGHSGTV
VRALYSRLAAKHRLRAWVQLLALVAGGAPVTSAVTIGRGQGRRPSAVARRLVAPSRDEAR
ELLAGLVAVRDLALREPLPLPVDQAERYASRRADGEEPGVILRDLDDRMVADRRFRGPDA
FEALAWGDGWRLSAVAGLPSDDERGLVPGEPTRFGVLARAVWDPLLAHERAEGSA
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
gtggccgggtccggcgtccacacgtcggcggtcgctgctacggtccgggacatgacgacg
acggcgcagcccccggctctcttcgaggtgccgcgtacgggtcgtctgttcgtccatacg
tcggagcgtgcggacgtgctcgtcggggagctggccgcggtgctcgcggcggacccgccg
gccgacccgttcgccgccgaggtcgtggccgtcccgacgcgaggcgtcgagcggtgggtc
gcgcagcggctgtcgcaccggctgggggcgctcgggatcggggtgggcggcgaggcgggc
gtctgcgcgaacgtcgtcttcgactcgccgtcgcgcgtgctgcaccgggtcgtggcgacc
gcgagcggcatcgaccccgacgccgacccgtgggaccgcgagcgcctcgcgtggcacgtg
ctgcgggtggtcgacgccgcggtcgcggccggcgaggcctgggccgcgccgctggcccgc
ttcctcacggacccgccgggtcaggcggcgtccgacggcgtccgcgaggcccggcgcatg
cgtcttgcccagcgtgtcgcggccctgttcgcggcgtacggctcgcagcggccgtcgctg
gtgacgtcgtgggccgacgggaccgacgacgacggcgcgggcgggccgctcccaccggac
ctggcgtggcagccgccgctgtggcgcgcggtgcgcgaggccgcgggagtgcccagcccg
gccgaacggctggcctcggcgacggccgtgctccgcgacgacccggacgccgtggacctg
ccggcccggctgtccgtgttcgggcccacccgtcttccggagtcggagctcgacgtcctc
gacgccctcggtgcgcatcgcgaggtgcacctgtggctcccccatccctcgcccgcgctg
tggcgtcgcgcgaccggcggcgtcgacggcgacgggcccggcggggcacgcccggcgccg
cgccgcgcggacgtcgcggtctccgcgcggcacccgctgctcggctcgctgggccgcgac
gcgaccgagctgagcctgcgcctggccgcccgcggggtcgaggcgaggcaccacccagcg
ccgacgcccccggagacggtcctcggggctctccaggcgtcgctccgggcggacgagcgc
cctgatcctgggtcacggctcgtcgcccccgacgacgaccggaccatccaggtgcacgcg
tgccacggccggtcccggcaggtggaggtgctccgcgaggccgtcgtcgggctgctggcc
gacgacccgacgctccagccgcgcgacgtcgtcgtgctgtgcccggacgtcgaggcgttc
gcgccgctggtcaacgcgacgttcggagccacgttcgaccgggacacgaccgacgacgcc
gacccgcacccgggccgcaccctgcgtgtccggatcgcggaccgggcgccggcgcgcacc
aacccgatgctgcgcgtcgtctccgacctgctgacgctcgcagggtcgcgcgtgacggcg
tcggcggtcgtggatctcgcgggtctcgaggcggtgcgccgccggttcgggttcgacgac
gacgccctcgagcggctccgggcgtggacgctcgcgtccggggtgcggtggggcgaggac
gcggcccggcgcagccggttcggggtgcgggtcgggcaggggacctgggccgcggccatg
gaccggctgctgctgggcgtcgccatgtccgacgacgactaccgccacctcgacgcgacg
ctcccgctcgacgatgtcggcagcacggaggtcgacctcgcgggccggttcgcggagctc
gtcgaccgcctcacgggcctgctggcggagctcgagggcacccggccggcgacggcgtgg
ttcgacacgctggaccgggcgctcgtcctgctcgccgacacggctcccgcagatcagtgg
cagcgggtcgaggcgcgcggcgtcctggccgacgcgcgcgctgcggcgagcaccgcggcg
tcgccggacggcggggcgctcctgcgcctgcccgacgtcgtcgcgctgctcgagcggcgg
ctcgccggtcgtcccacgcgggccgggttccgtacgggtgcgctcacggtgtgctcgctc
gagccgatgcgcgccgtcccgcaccgcgtcgtgtgcctgctgggtctcgacgacaccgcg
ttcccgcgggtcggcgccgtgagcggcgacgacgcgctcgcccgtgaccctctcgtcggc
gagcgtgaccgcaggtccgaggaccgccagctcttcctcgacgccgtcctcgccgcgacc
gaccacctcgtcgtcgtccactcgggtgccgacgagcggaccggccgcccgctgccgccg
gccgtcccggtgggcgagctcctcgactcggtcgacgagtgcgtcgtctttcccgggggc
ccgggcggtgcgccgcgcgacgcgcgcgcggcgctcgtcgtgcaccacccgctgcagacc
gtcgacgagcggaacttcgtgccgggcgcgctggggcgccgcgggccgttcagcttcgac
gacctggagcggcgcgcagccttcgtgggtcgccgtgaacgggtcggccggcggccgctc
ctcgactcgcccttgtctccggtcctcgacgacgacgcgacggtgggcctcgagggcacg
accggcctcgtcccgacgctcgagcacccggcgaaggccttcgtccgcgggcggctgggc
gtgtcgttgccccgcgacgaggacgacctcgaggaccggctgccgctcgagctcgacagc
ctcgacgggtgggccgcgggcgaccgcatcctcgcggccgtcctcgacggcggtgacctc
gacgtcgccgcgagcgccgagcggctgcgcggacggatgcccccggggcggctcggctcg
gcggcgctgcagggcatcacggacaacgtggctgcggtcgccgccgagtcagcgcccttc
gtacgggtcccggcagcgacgctcgacgtcaccgtgtcgctgccggacggacggaccgtc
accgggaccgtgccgggcatccggcggggcggcgagcatgcggggcacagcgggacggtc
gtgcgggcgctgtactcgcgcctcgccgccaagcaccggctgcgtgcctgggtgcagctc
ctcgcgctggtggcgggcggcgcgcccgtgacgtccgccgtcacgatcggccgcggtcag
gggcgccgtccgtccgcggtcgctcggcggctggtcgcccccagccgcgacgaggcccgc
gagctgctcgcggggctcgtcgcggtgcgcgacctcgcgctccgtgagcccctgccgctg
cccgtcgaccaggccgagcggtacgcgagccggcgcgccgacggcgaggagccgggggtg
atcctgcgcgacctcgacgaccgcatggtcgccgaccggcggttccgtggacctgacgcg
ttcgaggcgctcgcgtggggtgacggctggcgcctgtccgcggtcgcggggctcccgtcc
gacgacgagcgcggcctcgtccccggcgagccgacccggttcggggtgctcgcgcgcgcc
gtgtgggacccgttgctggcgcacgagagggcggaggggtccgcatga
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