KEGG   Luteimicrobium xylanilyticum: KDY119_00518
Entry
KDY119_00518      CDS       T06254                                 
Symbol
karS
Name
(GenBank) Lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
lxl  Luteimicrobium xylanilyticum
Pathway
lxl00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:lxl00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    KDY119_00518 (karS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:lxl01007]
    KDY119_00518 (karS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lxl03016]
    KDY119_00518 (karS)
Enzymes [BR:lxl01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     KDY119_00518 (karS)
Amino acid related enzymes [BR:lxl01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   KDY119_00518 (karS)
Transfer RNA biogenesis [BR:lxl03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    KDY119_00518 (karS)
 Prokaryotic type
   Other AARSs
    KDY119_00518 (karS)
SSDB
Motif
Pfam: LPG_synthase_C tRNA-synt_2 tRNA-synt_2_TM tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: QFU97025
UniProt: A0A5P9Q9D3
LinkDB
Position
complement(579967..583266)
AA seq 1099 aa
MLPRALDPEDVAAHAGRVLQCLLAWSVVSIPLVWAAPHLVRDVDAALRVTGVPVRPSAFH
AVLIALVTSGFLSRKRAALWFVVLVWQLPAVVVAGVSVALWSTPDGRALLAQAHVQVPAA
LAAGVVGALATTLLVRARSAFPAPLARGSWWRAGAVLVGGLVAAAALSRGILQAVPHGVD
RVRDTGLRQLLASTALHPVDLPLDPGPAWVGQLAGLLAAGALLAAIAVFLRSAPHDRGLG
PEDELDVRRLLLTTRLDAADSLGYFATRDDRAVVWAPGRSAAVSYRVVSGVCLAAGDPLG
DPDRWPAAVREWLELARSRGWAPAVLSASEQGARAYADAGLHVLGLGDEAVLDPASFHPD
GRALAGVRRAVRHAEQAGYHVLVRRQADVPEAELAELGRLADSWRDGEVERGFSMSLGRF
GDARDGRVVVVTAHDGTGATAGLLTFVPWGARGLSLDVMRRAPEAVGGVTELMVVRLVEH
QAARRGGRVSLNFAMFREPLAQGARLGATPREKLQRAALLLASRRWQLDSLYRANEKYLP
EWRTRYWCYDTAAQITLISYAAAQAEGFLPAAPALPFLAGRPAWRGGEEPRPAPQPARAA
AVRALENELGAPRPSERRLTDQEASRRTALRELRREGVDPYPATVTRTHALDDVLHVLDD
GSLPLGAPVSVTGRVVRVRDHGGVLFAVLRERTSELQVMFTADRPAGTALWRRTVDLADH
VAVTGHLVRSRTGEPTVHATSWTMAAKALRPPARALGDEARVRLRHQHLALDDLAAADLE
ARSAIVRALRDTLHARRFVEVETPVLQRTHGGANARPFVTHINAYDADLALRIAPELYLK
RLCVGGVGRVFEIGRNFRNEGADATHNPEFTSLEAYESHGDYTTMRALARDLVLAAAVAA
HGEPVARRGDDVVRLDGDWPVVTVHEAVSRAVGVRVTPDTDATTLRELGARHHVQVPDGT
TPGQLVTELYEELVEPATVEPTFYTDFPVETSPLTRAHRADPRLAERWDLVAAGMELGTA
YTELTDPLDQRDRLERQSLLAAGGDVEAMQVDEDFLTALEFGMPPTGGLGLGVDRLCMLL
LDRSIRETLTFPFVRPAAR
NT seq 3300 nt   +upstreamnt  +downstreamnt
gtgcttccccgtgcgctcgaccccgaggacgtcgccgcgcacgcggggcgcgtcctgcag
tgcctcctggcctggagcgtcgtctcgatcccgctcgtgtgggccgcgccgcacctcgtg
cgcgacgtcgacgcggccctgcgcgtcacgggcgtcccggtccggcccagcgccttccac
gccgtcctgatcgcgctggtgacgagcggcttcctcagccggaagcgcgcggcgctgtgg
ttcgtcgtcctcgtctggcagcttcccgcggtcgtcgtcgcgggtgtctcggtcgcgctg
tggagcacgccggacggacgcgccctgctcgcacaggcgcacgtccaggtccccgcggcg
ctcgccgccggggtcgtcggcgccctcgccacgacgctgctcgtccgtgcgcgctccgcg
ttccccgccccgctcgcccgcgggtcctggtggcgcgcgggcgcggtcctcgtgggcggg
ctcgtggccgctgccgccctgtcgcgggggatcctccaggccgtcccgcacggcgtcgac
cgtgtccgcgacacgggccttcgtcagctgctcgcgtcgacggccctgcaccccgtcgac
ctgcctctcgacccgggccccgcctgggtcggccagctcgccggactcctcgccgccggc
gccctgctcgccgcgatcgccgtcttcctgcgctcggcgccgcacgaccgcgggctcggc
cccgaggacgagctcgacgtccgccgcctcctgctcacgacgcgcctcgacgccgccgac
tccctcggctacttcgcgacccgcgacgaccgcgccgtcgtctgggcacccgggcggagc
gcggccgtgtcctaccgggtcgtgtcgggggtctgtctggcggccggcgaccccctcggc
gaccccgaccggtggcccgccgcggtccgggagtggctcgagctcgcgcggtcccgcggc
tgggcgcccgccgtgctgtccgcgagcgagcagggtgcccgggcctacgcggacgccggg
ctgcacgtcctcggtctcggggacgaggcggtgctcgacccggcgtcgttccaccccgac
gggcgggcgctggcgggcgtgcggcgagccgtgcggcacgcggagcaggccgggtaccac
gtgctcgtccgccgccaggcggacgtgcccgaggccgagctcgcggagctcggcaggctc
gccgactcgtggcgcgacggcgaggtcgagcgaggcttctcgatgtccctcggccggttc
ggcgacgcgcgcgacggcagggtcgtcgtcgtcaccgcgcacgacggcaccggcgcgacc
gccgggctgctgaccttcgtgccgtggggcgcgcgcggactctcgctcgacgtcatgcgc
cgcgcacccgaggccgtcggcggggtcaccgagctcatggtcgtgcgactggtggagcac
caggccgcgcgccgaggcggccgcgtctcgctcaacttcgcgatgttccgcgagccgctc
gcccagggtgcgcggctcggggccacgccgcgggagaagctccagcgtgcggcgctactc
ctggcgtcacgacgctggcagctcgactcgctgtaccgggccaacgagaagtacctgccc
gagtggcgcacgcgctactggtgctacgacaccgcagcgcagatcactctcatctcctac
gcggccgcccaggccgagggcttcctccccgccgccccggcgctgcccttcctggcgggc
cgaccggcgtggcgcggaggcgaggagcctcgcccggccccgcagcccgctcgcgccgcg
gccgtgcgtgccctcgagaacgagctcggggccccgcgcccctccgaacggcggctcacc
gaccaggaggcctcccgcaggacggcgctccgggagctgcggcgggagggcgtcgacccc
tacccggcgacggtgacccgcacccacgccctggacgacgtgctccacgtgctcgacgac
gggtccctcccgctcggtgcaccggtctcggtcaccggacgcgtggtccgcgtccgcgac
cacggaggggtcctgttcgcggtgctccgcgaacggacgagcgagctccaggtgatgttc
accgccgaccggcccgcggggaccgcgctctggcgccggaccgtcgacctcgccgaccac
gtcgcggtcaccggccacctcgtgcggtcccgcaccggagagccgacggtgcacgcgacg
tcctggacgatggccgccaaggcgctccgacctcccgcccgcgcgctcggcgacgaggcg
cgggtccggctgcgccaccagcacctcgcgctcgacgacctcgccgccgccgacctggag
gcccggtcggcgatcgtccgggcgctccgcgacaccctgcacgcacgccggttcgtcgag
gtcgagaccccggtgctccaacggacgcacggcggggcgaacgcacggccgttcgtcacc
cacatcaacgcctacgacgccgacctcgcccttcggatcgcgcccgagctctacctcaag
cggctctgcgtgggcggcgtcgggcgcgtgttcgagatcggccgcaacttccgcaacgag
ggcgcggacgccacgcacaacccggagttcacctccctcgaggcgtacgagtcccacggc
gactacacgaccatgcgcgccctcgcccgcgacctcgtcctcgcggcggccgtcgccgcg
cacggcgagcccgtcgcacgccgcggcgacgacgtcgtccgcctcgacggcgactggccg
gtcgtgacggtgcacgaagcggtctcgcgcgccgtcggcgtccgcgtcaccccggacacc
gacgcgacgaccctgcgcgagctgggcgcgcgccaccacgtccaggtaccggacgggacg
acgccgggacagctcgtcaccgagctctacgaggagctcgtcgagccggcgaccgtcgag
ccgaccttctacacggacttccccgtcgagacgtcgcccctgacccgcgcccaccgggcc
gacccgcgcctggcggaacgctgggacctggtcgcggccgggatggagctcggcaccgcg
tacaccgaactcacggacccgctcgaccagagggaccggctcgagcggcagtcgttgctc
gccgccgggggcgacgtcgaggcgatgcaggtcgacgaggacttcctcacggcgctcgag
ttcgggatgccacccaccggcgggctcgggctcggggtggaccgcctgtgcatgctcctg
ctcgaccgttcgatccgggagaccctcacgttccccttcgtgcgtcccgcggcgcgctga

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