Luteimicrobium xylanilyticum: KDY119_00518
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Entry
KDY119_00518 CDS
T06254
Symbol
karS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
lxl
Luteimicrobium xylanilyticum
Pathway
lxl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lxl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KDY119_00518 (karS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lxl01007
]
KDY119_00518 (karS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lxl03016
]
KDY119_00518 (karS)
Enzymes [BR:
lxl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
KDY119_00518 (karS)
Amino acid related enzymes [BR:
lxl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KDY119_00518 (karS)
Transfer RNA biogenesis [BR:
lxl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
KDY119_00518 (karS)
Prokaryotic type
Other AARSs
KDY119_00518 (karS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QFU97025
UniProt:
A0A5P9Q9D3
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All DBs
Position
complement(579967..583266)
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AA seq
1099 aa
AA seq
DB search
MLPRALDPEDVAAHAGRVLQCLLAWSVVSIPLVWAAPHLVRDVDAALRVTGVPVRPSAFH
AVLIALVTSGFLSRKRAALWFVVLVWQLPAVVVAGVSVALWSTPDGRALLAQAHVQVPAA
LAAGVVGALATTLLVRARSAFPAPLARGSWWRAGAVLVGGLVAAAALSRGILQAVPHGVD
RVRDTGLRQLLASTALHPVDLPLDPGPAWVGQLAGLLAAGALLAAIAVFLRSAPHDRGLG
PEDELDVRRLLLTTRLDAADSLGYFATRDDRAVVWAPGRSAAVSYRVVSGVCLAAGDPLG
DPDRWPAAVREWLELARSRGWAPAVLSASEQGARAYADAGLHVLGLGDEAVLDPASFHPD
GRALAGVRRAVRHAEQAGYHVLVRRQADVPEAELAELGRLADSWRDGEVERGFSMSLGRF
GDARDGRVVVVTAHDGTGATAGLLTFVPWGARGLSLDVMRRAPEAVGGVTELMVVRLVEH
QAARRGGRVSLNFAMFREPLAQGARLGATPREKLQRAALLLASRRWQLDSLYRANEKYLP
EWRTRYWCYDTAAQITLISYAAAQAEGFLPAAPALPFLAGRPAWRGGEEPRPAPQPARAA
AVRALENELGAPRPSERRLTDQEASRRTALRELRREGVDPYPATVTRTHALDDVLHVLDD
GSLPLGAPVSVTGRVVRVRDHGGVLFAVLRERTSELQVMFTADRPAGTALWRRTVDLADH
VAVTGHLVRSRTGEPTVHATSWTMAAKALRPPARALGDEARVRLRHQHLALDDLAAADLE
ARSAIVRALRDTLHARRFVEVETPVLQRTHGGANARPFVTHINAYDADLALRIAPELYLK
RLCVGGVGRVFEIGRNFRNEGADATHNPEFTSLEAYESHGDYTTMRALARDLVLAAAVAA
HGEPVARRGDDVVRLDGDWPVVTVHEAVSRAVGVRVTPDTDATTLRELGARHHVQVPDGT
TPGQLVTELYEELVEPATVEPTFYTDFPVETSPLTRAHRADPRLAERWDLVAAGMELGTA
YTELTDPLDQRDRLERQSLLAAGGDVEAMQVDEDFLTALEFGMPPTGGLGLGVDRLCMLL
LDRSIRETLTFPFVRPAAR
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
gtgcttccccgtgcgctcgaccccgaggacgtcgccgcgcacgcggggcgcgtcctgcag
tgcctcctggcctggagcgtcgtctcgatcccgctcgtgtgggccgcgccgcacctcgtg
cgcgacgtcgacgcggccctgcgcgtcacgggcgtcccggtccggcccagcgccttccac
gccgtcctgatcgcgctggtgacgagcggcttcctcagccggaagcgcgcggcgctgtgg
ttcgtcgtcctcgtctggcagcttcccgcggtcgtcgtcgcgggtgtctcggtcgcgctg
tggagcacgccggacggacgcgccctgctcgcacaggcgcacgtccaggtccccgcggcg
ctcgccgccggggtcgtcggcgccctcgccacgacgctgctcgtccgtgcgcgctccgcg
ttccccgccccgctcgcccgcgggtcctggtggcgcgcgggcgcggtcctcgtgggcggg
ctcgtggccgctgccgccctgtcgcgggggatcctccaggccgtcccgcacggcgtcgac
cgtgtccgcgacacgggccttcgtcagctgctcgcgtcgacggccctgcaccccgtcgac
ctgcctctcgacccgggccccgcctgggtcggccagctcgccggactcctcgccgccggc
gccctgctcgccgcgatcgccgtcttcctgcgctcggcgccgcacgaccgcgggctcggc
cccgaggacgagctcgacgtccgccgcctcctgctcacgacgcgcctcgacgccgccgac
tccctcggctacttcgcgacccgcgacgaccgcgccgtcgtctgggcacccgggcggagc
gcggccgtgtcctaccgggtcgtgtcgggggtctgtctggcggccggcgaccccctcggc
gaccccgaccggtggcccgccgcggtccgggagtggctcgagctcgcgcggtcccgcggc
tgggcgcccgccgtgctgtccgcgagcgagcagggtgcccgggcctacgcggacgccggg
ctgcacgtcctcggtctcggggacgaggcggtgctcgacccggcgtcgttccaccccgac
gggcgggcgctggcgggcgtgcggcgagccgtgcggcacgcggagcaggccgggtaccac
gtgctcgtccgccgccaggcggacgtgcccgaggccgagctcgcggagctcggcaggctc
gccgactcgtggcgcgacggcgaggtcgagcgaggcttctcgatgtccctcggccggttc
ggcgacgcgcgcgacggcagggtcgtcgtcgtcaccgcgcacgacggcaccggcgcgacc
gccgggctgctgaccttcgtgccgtggggcgcgcgcggactctcgctcgacgtcatgcgc
cgcgcacccgaggccgtcggcggggtcaccgagctcatggtcgtgcgactggtggagcac
caggccgcgcgccgaggcggccgcgtctcgctcaacttcgcgatgttccgcgagccgctc
gcccagggtgcgcggctcggggccacgccgcgggagaagctccagcgtgcggcgctactc
ctggcgtcacgacgctggcagctcgactcgctgtaccgggccaacgagaagtacctgccc
gagtggcgcacgcgctactggtgctacgacaccgcagcgcagatcactctcatctcctac
gcggccgcccaggccgagggcttcctccccgccgccccggcgctgcccttcctggcgggc
cgaccggcgtggcgcggaggcgaggagcctcgcccggccccgcagcccgctcgcgccgcg
gccgtgcgtgccctcgagaacgagctcggggccccgcgcccctccgaacggcggctcacc
gaccaggaggcctcccgcaggacggcgctccgggagctgcggcgggagggcgtcgacccc
tacccggcgacggtgacccgcacccacgccctggacgacgtgctccacgtgctcgacgac
gggtccctcccgctcggtgcaccggtctcggtcaccggacgcgtggtccgcgtccgcgac
cacggaggggtcctgttcgcggtgctccgcgaacggacgagcgagctccaggtgatgttc
accgccgaccggcccgcggggaccgcgctctggcgccggaccgtcgacctcgccgaccac
gtcgcggtcaccggccacctcgtgcggtcccgcaccggagagccgacggtgcacgcgacg
tcctggacgatggccgccaaggcgctccgacctcccgcccgcgcgctcggcgacgaggcg
cgggtccggctgcgccaccagcacctcgcgctcgacgacctcgccgccgccgacctggag
gcccggtcggcgatcgtccgggcgctccgcgacaccctgcacgcacgccggttcgtcgag
gtcgagaccccggtgctccaacggacgcacggcggggcgaacgcacggccgttcgtcacc
cacatcaacgcctacgacgccgacctcgcccttcggatcgcgcccgagctctacctcaag
cggctctgcgtgggcggcgtcgggcgcgtgttcgagatcggccgcaacttccgcaacgag
ggcgcggacgccacgcacaacccggagttcacctccctcgaggcgtacgagtcccacggc
gactacacgaccatgcgcgccctcgcccgcgacctcgtcctcgcggcggccgtcgccgcg
cacggcgagcccgtcgcacgccgcggcgacgacgtcgtccgcctcgacggcgactggccg
gtcgtgacggtgcacgaagcggtctcgcgcgccgtcggcgtccgcgtcaccccggacacc
gacgcgacgaccctgcgcgagctgggcgcgcgccaccacgtccaggtaccggacgggacg
acgccgggacagctcgtcaccgagctctacgaggagctcgtcgagccggcgaccgtcgag
ccgaccttctacacggacttccccgtcgagacgtcgcccctgacccgcgcccaccgggcc
gacccgcgcctggcggaacgctgggacctggtcgcggccgggatggagctcggcaccgcg
tacaccgaactcacggacccgctcgaccagagggaccggctcgagcggcagtcgttgctc
gccgccgggggcgacgtcgaggcgatgcaggtcgacgaggacttcctcacggcgctcgag
ttcgggatgccacccaccggcgggctcgggctcggggtggaccgcctgtgcatgctcctg
ctcgaccgttcgatccgggagaccctcacgttccccttcgtgcgtcccgcggcgcgctga
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