KEGG   Luteimicrobium xylanilyticum: KDY119_00809
Entry
KDY119_00809      CDS       T06254                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
lxl  Luteimicrobium xylanilyticum
Pathway
lxl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lxl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KDY119_00809 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lxl03021]
    KDY119_00809 (rpoB)
   03400 DNA repair and recombination proteins [BR:lxl03400]
    KDY119_00809 (rpoB)
Enzymes [BR:lxl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     KDY119_00809 (rpoB)
Transcription machinery [BR:lxl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     KDY119_00809 (rpoB)
DNA repair and recombination proteins [BR:lxl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      KDY119_00809 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: QFU97311
UniProt: A0A5P9Q7C0
LinkDB
Position
941113..944622
AA seq 1169 aa
MAASRTPSAPSADAIANRTASPRVSFAKIYEPLGVPDLLGLQTESFDWLLGNDKWQARVA
AAAEAGRQDVPDTSGLEEIFEEISPIEDFGQTMSLSFSNHRFEPPKYTADECKEKDFTYA
APLFVTAEFVNYTTGEIKSQTVFMGDFPLMSERGTFIINGTERVVVSQLVRSPGVYFERV
ADKTSDRDIFSAKVIPSRGAWLEFEIDKRDAVGVRVDRKRKQSVTVLLKALGMTEEEIRT
EFAAFPSVLDTLEKDHVHTQDEALLDLYRKIRPGEPPTVEAGRALLENFYFNPKRYDLAK
VGRYKLNKKLGVDVPLADSTLSQADVVATIKYLAALHADVTSLPGARNGETVDVRVETDD
IDHFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVASIKE
FFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETP
EGPNIGLIGSLASYGRINPFGFIETPYRRVVNGRVTDEVEYLTADDEDRHVIAQANTPLA
ADGTFVTDRVLVRIKGGETDDVLAANVDYMDVSPRQMVSVATALIPFLEHDDANRALMGA
NMQRQAVPLVRSELPLVGTGMERRAAVDAGDVIVATKPGVVTEVSADLVTVVNDDGTTST
YRASKFQRSNQGTSYNQRVIVDEGQRVEVGSVLGDGPATDEGELALGRNLLVAFMSWEGH
NYEDAIILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEALADLDERGI
IRIGAEVAAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGTVIG
VREFNREDGDELPAGVNQLVRVYIAQRRKITDGDKLAGRHGNKGVISKILPVEDMPFLAD
GTPVDVILNPLGVPGRMNVGQVLETHLGWVAKQGWDISLAEGEDLSWRDDVPEIAAKAAP
NSPVATPVFDGLQENALAGLLSTTLPNRDGVRTVGGDGKAQLFDGRSGEPFPAPVSVGYM
YILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEL
LTIKSDDVPGRVKVYEAIVKGENIPDSGIPESFKVLLKEMQSLCLNVEVLSSDGTTVEMR
ESDDEVYRAAEELGIDLSRRPNASSVEEI
NT seq 3510 nt   +upstreamnt  +downstreamnt
ttggctgcctcgcgcaccccttctgctccgtccgctgacgccatcgcgaaccgaaccgcc
tccccccgcgtctccttcgccaagatctacgagcccctcggtgtgcccgacctcctcggt
ctccagaccgagagcttcgactggctcctgggcaacgacaagtggcaggcgcgcgtcgcc
gccgctgccgaggccgggcgtcaggacgtccctgacacctccggcctcgaggagatcttc
gaggagatctcgccgatcgaggacttcggccagacgatgtccctctccttctccaaccac
cgcttcgagccgcccaagtacacggcggacgagtgcaaggagaaggacttcacgtacgcc
gcgccgctcttcgtcaccgccgagttcgtcaactacacgaccggtgagatcaagagccag
accgtgttcatgggcgacttcccgctcatgagcgagcgtggcacgttcatcatcaacggg
accgagcgtgtcgtcgtctcgcagctcgtccgctccccgggcgtgtacttcgagcgcgtc
gcggacaagaccagcgaccgcgacatcttcagcgcgaaggtcatcccgtcgcgcggtgcc
tggctcgagttcgagatcgacaagcgcgacgccgtcggcgtgcgcgtcgaccgcaagcgc
aagcagtccgtgaccgtcctcctcaaggcgctcggcatgaccgaagaggaaattcgcacg
gagtttgccgccttcccgtccgtcctcgacaccctcgagaaggaccacgtccacacccag
gacgaggcgctgctggacctctaccgcaagatccgcccgggcgagccgccgacggtcgag
gccggccgcgcgctgctcgagaacttctacttcaacccgaagcgctacgacctcgcgaag
gtcggccgctacaagctgaacaagaagctcggcgtcgacgtcccgctcgcggactccacg
ctgtcccaggccgacgtcgtcgcgaccatcaagtacctggctgcgctgcacgccgacgtc
acgtccctcccgggcgcccggaacggcgagaccgtcgacgtgcgcgtcgagacggacgac
atcgaccacttcggcaaccgtcgcatccgcgccgtcggcgagctcatccagaaccaggtc
cgcacgggcctgtcccggatggagcgcgtcgtgcgcgagcgcatgacgacgcaggacgtc
gaggcgatcacaccgcagacgctgatcaacatccgccccgtcgtggcctccatcaaggag
ttcttcgggacgagccagctgtcgcagttcatggaccagaacaacccgctcgcgggcctg
acgcacaagcggcgtctgtcggccctcggcccgggcggtctgtcccgcgaccgcgccggc
atggaggtccgtgacgtccacccgtcgcactacggccgcatgtgcccgatcgagacccct
gagggcccgaacatcggtctgatcggctcgctcgcgtcgtacgggcggatcaacccgttc
ggcttcatcgagacgccgtaccgccgggtcgtcaacggccgggtcaccgacgaggtcgag
tacctgaccgcggacgacgaggaccggcacgtcatcgcccaggcgaacacgcctctcgcg
gccgacggcacgttcgtcaccgaccgcgtcctggttcgcatcaagggcggggagaccgac
gacgtcctcgcggcgaacgtcgactacatggacgtctcgccgcgccagatggtgtcggtc
gcgaccgcgctcatcccgttcctcgagcacgacgacgcgaaccgcgcgctcatgggcgcc
aacatgcagcgccaggccgtgccgctcgtgcgctccgagctcccgctcgtgggcaccggc
atggagcgtcgtgcggccgtggacgccggcgacgtcatcgtggcgaccaagcccggtgtc
gtcaccgaggtctcggccgacctggtcaccgtcgtgaacgacgacggcaccacgtcgacc
taccgcgcgtcgaagttccagcgctccaaccagggcacgagctacaaccagcgcgtgatc
gtggacgagggccagcgcgtcgaggtcgggtccgtcctcggtgacggcccggcgacggac
gagggcgagctcgcgctcggccggaacctgctcgtcgcgttcatgtcgtgggagggccac
aactacgaggacgcgatcatcctcagccagcggctcgtccaggacgacgtcctgtcctcg
atccacatcgaggagcacgaggtcgacgcgcgcgacaccaagctcggcccggaggagatc
acgcgggacatcccgaacgtctccgaggaggccctggccgacctcgacgagcgcgggatc
atccgcatcggcgccgaggtcgcggccggcgacatcctggtcgggaaggtcacgcccaag
ggcgagaccgagctgaccccggaggagcgcctgctccgcgcgatcttcggtgagaaggcg
cgcgaggtccgcgacacgtcgctcaaggttccccacggcgagtcgggcaccgtcatcggc
gtgcgcgagttcaaccgcgaggacggcgacgagctgcccgccggcgtgaaccagctggtc
cgcgtgtacatcgcgcagcgccgcaagatcacggacggcgacaagctcgccggccgtcac
ggcaacaagggcgtcatctcgaagatcctgccggtcgaggacatgccgttcctcgccgac
gggaccccggtcgacgtgatcctcaacccgctcggcgtgcccggtcgcatgaacgtcggc
caggtgctcgagacccacctcgggtgggtcgccaagcagggctgggacatctcgctcgcc
gagggtgaggacctctcctggagggacgacgtcccggagatcgcggccaaggcggcgccc
aactcgcccgtcgcgacgcccgtgttcgacggcctgcaggagaacgcgctcgcgggtctg
ctgtcgaccacgctcccgaaccgcgacggtgtgcgcaccgtgggcggcgacggcaaggcg
cagctgttcgacggccgctccggcgagccgttcccggcgcccgtctcggtcggctacatg
tacatcctgaagctgcaccacctggtggacgacaagatccacgcgcgctcgacgggtccg
tactcgatgatcacgcagcagccgctcggtggtaaggcgcagttcggcggacagcgtttc
ggcgagatggaggtgtgggcgctcgaggcctacggcgcggcgtacacgctgcaggagctc
ctcaccatcaagtccgacgacgtccccggccgcgtcaaggtgtacgaggccatcgtcaag
ggcgagaacatccccgactcgggcatcccggagtccttcaaggtcctcctcaaggagatg
cagtcgctgtgcctgaacgtggaggtcctgtcctcggacggcaccacggtcgagatgcgc
gagtccgacgacgaggtgtaccgcgccgcggaggagctcgggatcgacctgtcgcgtcgc
ccgaacgcctccagcgtcgaagagatctga

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