Luteimicrobium xylanilyticum: KDY119_01435
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Entry
KDY119_01435 CDS
T06254
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lxl
Luteimicrobium xylanilyticum
Pathway
lxl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lxl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDY119_01435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lxl03019
]
KDY119_01435
03016 Transfer RNA biogenesis [BR:
lxl03016
]
KDY119_01435
Enzymes [BR:
lxl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KDY119_01435
Messenger RNA biogenesis [BR:
lxl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KDY119_01435
Transfer RNA biogenesis [BR:
lxl03016
]
Prokaryotic type
tRNA degradation factors
KDY119_01435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
PSII_Pbs27
Motif
Other DBs
NCBI-ProteinID:
QFU97929
UniProt:
A0A5P9Q992
LinkDB
All DBs
Position
1617225..1619486
Genome browser
AA seq
753 aa
AA seq
DB search
MEGPEIQFAEAVIDNGRFGTRTVRFETGRLARQAAGSVAAYLDGETMILSTTTAGKHPKD
QFDFFPLTVDVEERQYAAGKIPGSFFRREGRPSTEAILTCRLIDRPLRPLFVKGLRNEVQ
VVETVLAVHPDDPYDVVAINAASISTQISGLPFSGPVGAVRISLIDGQWVAFPRYSESAR
GVFDMVIAGRIVTNEDGESDVAIAMIEAEATDESWKLIKEQGATAPTEQVVAEGIEAAKP
FIRALAEAQAELAAKAAKPTAEFPLFPDYQPDAYAAVEAAAAARLGEALSIADKQDRENR
LDEIKAEVQGELAEEFAGREKEISAAYRSVQKALVRQRILTDGFRIDGRGLRDIRTLSAE
VEVVPRVHGSALFERGETQILGVTTLNMLRMEQQIDSLGPVTRKRYMHNYNFPPYSTGET
GRVGSPKRREIGHGALAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTLSM
LNAGVPLRAPVAGIAMGLVSDQVEGKTRYAAMTDILGAEDAFGDMDFKVAGTSEFVTAIQ
LDTKLDGIPASVLADALTQARDARLTILEVLAEAIDVPDEMSPNAPRVITVKVPTDKIGE
VIGPKGKMINQIQEETGADISIEDDGTVYIGATDGPSAEAARAAINAIANPHVPEVGERF
VGTVVKTTSFGAFISLSPGKDGLLHISQIRKLVGGKRVEAVEDVLSIGQKVQVEIGEIDP
RGKLSLHAVVEESADEKSEGASDDAAAAESTND
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
gtggagggtcccgagatccagttcgccgaagccgtcatcgacaacggccgcttcggcacc
cgcaccgtccgcttcgagaccgggcgcctcgcccgccaggccgcgggctccgtggccgcc
tacctcgacggcgagacgatgatcctgtcgaccacgacggccggcaagcaccccaaggac
cagttcgacttcttcccgctgacggtcgacgtcgaggagcggcagtacgccgccggcaag
atccccggctcgttcttccgccgcgagggccgcccgtccaccgaggcgatcctcacgtgc
cgcctgatcgaccgcccgctgcgcccgctgttcgtcaagggtctgcgcaacgaggtccag
gtcgtcgagaccgtcctcgccgtccacccggacgacccgtacgacgtcgtcgcgatcaac
gcggcctcgatctcgacgcagatctccggcctgccgttctccggcccggtcggcgcggtc
cgcatcagcctgatcgacggccagtgggtcgccttcccgcgctactcggagagcgcgcgc
ggcgtgttcgacatggtcatcgcgggccgcatcgtcacgaacgaggacggcgagtccgac
gtcgcgatcgcgatgatcgaggccgaggcgaccgacgagtcgtggaagctcatcaaggag
cagggcgccacggccccgaccgagcaggtcgtcgccgaaggcatcgaggccgccaagccg
ttcatccgcgcgctcgcggaggctcaggccgagctcgccgcgaaggccgccaagccgacc
gccgagttcccgctcttcccggactaccagcccgacgcctacgccgcggtcgaggccgct
gccgccgcacgcctgggcgaggccctgtcgatcgcggacaagcaggaccgcgagaaccgc
ctcgacgagatcaaggccgaggtccagggcgagctcgccgaggaattcgcgggccgcgag
aaggagatctccgccgcgtaccgctcggtgcagaaggcgctggtccgccagcgcatcctc
accgacggcttccgcatcgacggccgtggcctgcgggacatccgcacgctgtcggccgag
gtcgaggtcgtcccccgcgtgcacggctcggcgctgttcgagcggggcgagacccagatc
ctgggcgtcaccacgctgaacatgctgcgcatggagcagcagatcgactccctcgggccg
gtcacgcgcaagcgctacatgcacaactacaacttcccgccgtactcgaccggtgagacg
ggccgtgtgggctcgcccaagcgtcgcgagatcggtcacggcgcgctcgccgagcgggcc
ctcgtgccggtgcttccgtcgcgcgaggagttcccctacgcgatccgccaggtctccgag
gcgctgggctccaacggctcgacgtcgatgggctccgtctgcgcgtcgaccctgtcgatg
ctcaacgccggcgtcccgctgcgcgcgccggtcgccggcatcgcgatgggcctcgtctcc
gaccaggtcgagggcaagacccgctacgcggcgatgaccgacatcctgggcgccgaggac
gcgttcggcgacatggacttcaaggtcgccggcacgagcgagttcgtcacggcgatccag
ctcgacacgaagctcgacggcatccccgcctcggtgctcgcggacgcgctgacccaggcc
cgtgacgcccgcctcacgatcctcgaggtcctcgccgaggcgatcgacgtcccggacgag
atgtccccgaacgcgccccgcgtcatcacggtgaaggtcccgaccgacaagatcggcgag
gtcatcggcccgaagggcaagatgatcaaccagatccaggaggagacgggcgccgacatc
tcgatcgaggacgacggcaccgtctacatcggcgcgaccgacgggccgtcggccgaggcc
gcccgggccgcgatcaacgcgatcgcgaacccgcacgtacccgaggtcggcgagcgcttc
gtcggcacggtcgtcaagaccacgtcgttcggcgcgttcatctcgctctccccgggcaag
gacggactgctgcacatctcgcagatccgcaagctcgtgggcggcaagcgcgtcgaggcc
gtcgaggacgtcctgtcgatcgggcagaaggtccaggtcgagatcggcgagatcgacccg
cgcggcaagctgtcgctccacgcggtcgtcgaggagtccgcggacgagaagtccgagggc
gcgtccgacgacgcggccgcggccgagagcacgaacgactga
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