Luteimicrobium xylanilyticum: KDY119_01475
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Entry
KDY119_01475 CDS
T06254
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lxl
Luteimicrobium xylanilyticum
Pathway
lxl00300
Lysine biosynthesis
lxl00470
D-Amino acid metabolism
lxl01100
Metabolic pathways
lxl01110
Biosynthesis of secondary metabolites
lxl01120
Microbial metabolism in diverse environments
lxl01230
Biosynthesis of amino acids
Module
lxl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lxl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KDY119_01475 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KDY119_01475 (dapF)
Enzymes [BR:
lxl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KDY119_01475 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QFU97969
UniProt:
A0A5P9Q9D2
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All DBs
Position
1661858..1662868
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AA seq
336 aa
AA seq
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MTEPVEAAPDELAFVKGHGTRNDFVLVADLDGRLDLTPDLVRRLADRRAGVGADGVVRLV
PSSRLPEGAAVLAEDPAAVWFMDYRNADGSVAEMCGNGVRVFAAFAELLDLVDLSDGSTL
SVGTRAGVKRVVREPNGWYAVDMGPWTFPGGDDAVARGADAQVAVHGWRAARPALSVDLG
NPHTVVALADATELEGLDLTVAPQVHPVPPHGTNVELVVPLGEQGGSADDAGAKVGRVRM
RVFERGVGETESCGTGTCAAALAVRAWAGPGAPDTWLVDVPGGTLRVRALPGGRVELAGP
AVLAYAGRFPLVGGPDAPALVEPIAAHLTAGAPAAP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacccgtggaggccgcacccgacgagctcgccttcgtcaagggtcacggcaca
cgcaacgacttcgtcctcgtggccgacctcgacggccgactggacctcacgccggacctc
gtcaggcggctcgccgaccgccgtgccggcgtgggcgccgacggcgtcgtccgcctcgtg
ccgtcgtcgcgcctgcctgagggcgcggccgtcctggccgaggatcccgccgccgtctgg
ttcatggactaccgcaacgcggacggctccgtcgccgagatgtgcggcaacggcgtgcgt
gtcttcgcggcgttcgccgagctcctcgacctcgtcgacctctcggacgggagcacgctc
tccgtcggcacgcgcgcaggcgtcaagcgggtcgtccgcgagccgaacggctggtacgcc
gtcgacatggggccgtggacgttccccggcggcgacgacgcggtcgcgcgcggggcggac
gcccaggtcgccgtccacggctggcgcgccgcccgtcccgcgctcagcgtcgacctcggc
aacccgcacaccgtggtggcgctcgcggacgcgaccgagctcgaagggctcgacctcacg
gtcgccccgcaggtgcaccccgtcccgccgcacgggacgaacgtcgagctcgtggtgccg
ctcggcgagcagggcggcagcgccgacgacgcgggcgcgaaggtgggccgcgtgcgcatg
cgcgtcttcgagcggggcgtgggggagaccgagtcgtgcgggaccggtacgtgcgcggcg
gcgctcgccgtgcgcgcgtgggcggggccgggcgcccccgacacgtggctcgtcgacgtc
cccggcgggacgctgcgcgtgcgtgcgctgcccggcggaagggtcgagctcgccggcccg
gccgtgctggcctacgcgggtcggttcccgctggtcggcggccccgacgccccggcgctg
gtcgagcccatcgcggcgcacctcacggctggtgcacccgcagcaccctga
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