Luteimicrobium xylanilyticum: KDY119_01516
Help
Entry
KDY119_01516 CDS
T06254
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lxl
Luteimicrobium xylanilyticum
Pathway
lxl03030
DNA replication
lxl03430
Mismatch repair
lxl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDY119_01516 (dnaE)
03430 Mismatch repair
KDY119_01516 (dnaE)
03440 Homologous recombination
KDY119_01516 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxl03032
]
KDY119_01516 (dnaE)
03400 DNA repair and recombination proteins [BR:
lxl03400
]
KDY119_01516 (dnaE)
Enzymes [BR:
lxl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDY119_01516 (dnaE)
DNA replication proteins [BR:
lxl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KDY119_01516 (dnaE)
DNA repair and recombination proteins [BR:
lxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KDY119_01516 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
DUF2866
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QFU98010
UniProt:
A0A5P9QA58
LinkDB
All DBs
Position
1706280..1709813
Genome browser
AA seq
1177 aa
AA seq
DB search
MPTGEDFVHLHVHTEYSMLDGAARLDSLFSEVERLGQKSIAITDHGYLFGAFEFWSKARS
HGIKPILGVEAYITPGTSRFDQTRVRFGQQGQESDDVSARGAYTHMTMWARNNEGLHNLF
RASSLASLEGQMGKWPRMDRDLLETYAGGMAASTGCPSGEIQTRLRLGQWDEAVRVAGEL
QDIYGKEYFYVELMDHGLDIERRVIKDLLRLAEAIDAPLLATNDLHYVRQEDATSQEALL
AINSGSTLDDPDRFKFDGDGYYVKSAEEMRRVWAELPEACDNTLRLAEQCEVSFDTSANY
MPRFPVPDGEDETSWFVKEVEAGLHRRYPDGVPEASRKQAEYETEVILQMGFPGYFLVVA
DFINWAKSQGIRVGPGRGSAAGSMASYVMGITELDPLQHGLIFERFLNPERVSMPDVDVD
FDERRRGEVIKYVTDKYGDDRVSQVVTYGTIKAKQALKDSSRLLGFPFAMGEKLTKAMPP
AVMGKDISLGGIFNPQDPRYGEAEQFRQVHSADPEAQRVVELARGIEGLKRQWGVHACAL
IMSSVPLTNVIPTMRRPQDGAIITQFDYPTSETLGLIKMDFLGLRNLTILDDALGNIVAN
GKEPVEIESVPLDDEAAYALLTRGDTLGVFQLDGGPMRALLRQMRPDNFEDISAVIALYR
PGPMGMNSHTNYALRKNGLQEITPIHPELEKPLAEVLGETYGLIVYQEQVQRAAQILAGY
SLGQADLLRRAMGKKKKEILDKEFVPFQTGMRERGYSDKAIQAVWDTLVPFAGYAFNKAH
SAGYGLVSYWTAFMKANYPTEYMAALLTSVRDDKDKSALYLSECRRMGITVLPPDVNSSA
ANFTAVGDDIRFGLTAVRNVGANVVDAITATREDKGEFTSFTDFLDKVPAVVCNKRTIES
LIKAGAFDSLGHTRRALLAVHEMAVDSVISVKRKEAEGQFDLFADFAADDDGATVGFSVD
VPDLPDWEKKQRLAFEREMLGLYVSDHPLSGLEHVLSRAAETTIAALLADEERADGSTVT
IAGLLTNVQHRWSKNGNPWASVAVEDLEGSVEVMFFGETYLAYSTILAEDTVVTLRGRVR
RRDDAMQLQAMEVSLPDVSASPDGPVTVSLPSVRCTQPVVERLREILRTHPGASEVHLKL
TEPGRATVMRLEDTLRVERTPALFGDLKALLGPSCLV
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccggggaagacttcgtccacctccacgtccacaccgagtactcgatgctcgac
ggcgcggcccgcctcgactcgttgttctccgaggtggagcggctcggccagaagtcgatc
gcgatcacggaccacgggtacctgttcggcgcgttcgagttctggagcaaggcgaggtcg
cacgggatcaagccgatcctcggcgtcgaggcgtacatcaccccgggcacgagccggttc
gaccagacgagggtgcggttcggccagcagggccaggagtcggacgacgtgtcggcgcgc
ggcgcgtacacgcacatgacgatgtgggcgcggaacaacgagggtctgcacaacctgttc
cgggcgagctcgctggcgtcgctcgagggccagatgggcaagtggccgcgcatggaccgg
gacctgctggagacgtacgcgggcgggatggcggcgtcgacggggtgcccgtcgggggag
atccagacacggctgcggctgggccagtgggacgaggcggtccgggtggccggcgagctg
caggacatctacggcaaggagtacttctacgtcgagctgatggaccacgggctggacatc
gagcgacgcgtgatcaaggacctgctgcgcctggcggaggcgatcgacgcgccgctgctc
gcgacgaacgacctgcactacgtgcgccaggaggacgcgacctcgcaggaggcgctcctg
gcgatcaactcgggctccacgctggacgacccggaccggttcaagttcgacggcgacggc
tactacgtgaagtcggcggaggagatgcgccgggtgtgggcggagctgccggaggcgtgc
gacaacacgctgcggctggcggagcagtgcgaggtgtcgttcgacacgtcggcgaactac
atgccgcggttcccggtgcccgacggcgaggacgagacgagctggttcgtcaaggaggtc
gaggcgggcctgcaccgccggtaccccgacggcgtgcctgaggcgtcgcgcaagcaggcg
gagtacgagaccgaggtcatcctgcagatgggcttcccggggtacttcctcgtggtcgcc
gacttcatcaactgggccaagtcgcaaggcatccgggtggggccgggccgtggttcggcg
gcgggctccatggcctcgtacgtcatgggcatcaccgagctggacccgctgcagcacggg
ctgatcttcgagcgcttcctcaacccggagcgcgtctccatgcccgacgtcgacgtggac
ttcgacgagcgtcggcgcggtgaggtcatcaagtacgtcacggacaagtacggcgacgac
cgcgtctcgcaggtcgtcacctacggcacgatcaaggcgaagcaggcgctgaaggactcg
tcgcgcctgctgggcttcccgttcgcgatgggggagaagctcaccaaggcgatgccgccc
gcggtcatgggcaaggacatctcgctgggcgggatcttcaacccgcaggacccgcgctac
ggcgaggccgagcagttccgccaggtgcacagcgcggacccggaggcgcagcgcgtcgtc
gagctcgcgcggggcatcgaggggctgaagcggcagtggggcgtgcacgcctgcgcgctc
atcatgtcgagcgtcccgctgacgaacgtcatcccgaccatgcgtcgcccgcaggacggc
gcgatcatcacccagttcgactacccgacgtcggagacgctcgggctgatcaagatggac
ttcctcgggctgcggaacctgacgatcctcgacgacgcgctcggcaacatcgtcgcgaac
ggcaaggagccggtcgagatcgagtcggtcccgctcgatgacgaggccgcatacgcgctg
ctgacccgaggcgacacgctgggcgtgttccagctcgacggcggcccgatgcgcgcgctg
ctccggcagatgcgtcccgacaacttcgaggacatctccgccgtcatcgcgctgtaccgc
ccgggcccgatgggcatgaactcgcacacgaactacgcgctgcgcaagaacgggctgcag
gagatcaccccgatccacccggagctcgagaagccgctcgcggaggtgctgggcgagacg
tacggcctgatcgtctaccaggagcaggtccagcgcgccgcccagatcctcgcgggctac
tcgctgggccaggcggacctgctgcgtcgcgcgatggggaagaagaagaaggagatcctc
gacaaggagttcgtgcccttccagacgggcatgcgcgagcggggctactccgacaaggcg
atccaggccgtctgggacacgctggtcccgttcgcgggctacgccttcaacaaggcgcac
tcggcgggctacggcctggtgtcgtactggaccgccttcatgaaggcgaactacccgacg
gagtacatggcggcgctgctgacgagcgtgcgcgacgacaaggacaagtcggcgctgtac
ctgtcggagtgccgccggatggggatcacggtgctgccgccggacgtgaactcgtccgcc
gcgaacttcacggcggtcggcgacgacatccggttcggtctgaccgcggtccgcaacgtg
ggcgcgaacgtcgtcgacgcgatcaccgcgacccgcgaggacaagggcgagttcacctcg
ttcacggacttcctcgacaaggtcccggccgtcgtgtgcaacaagaggaccatcgagtcg
ctcatcaaggcgggtgcgttcgactcgctcgggcacacgcgccgcgcgctgctcgccgtc
cacgagatggccgtcgactcggtgatcagcgtcaagcgcaaggaggccgaggggcagttc
gacctgttcgcggacttcgccgccgacgacgacggcgccaccgtcgggttcagcgtggac
gtcccggacctcccggactgggagaagaagcagcggctcgcgttcgagcgcgagatgctg
gggctctacgtctcggaccatccgctctccggcctcgagcacgtgctgtcgcgcgccgcg
gagacgacgatcgcggcgctgctggccgacgaggagcgggccgacggctcgaccgtgacg
atcgcgggcctgctgaccaacgtccagcaccggtggtcgaagaacggcaacccgtgggcg
tccgtcgccgtggaggacctcgagggctcggtcgaggtcatgttcttcggcgagacgtac
ctcgcgtactcgacgatcctcgcggaggacaccgtcgtgaccctgcgggggcgcgtgcgc
cgtcgggacgacgcgatgcagctccaggcgatggaggtgtcgctcccggacgtctcggcg
tcgcctgacggcccggtgacggtgagcctgccgtcggtgcggtgcacgcagcccgtggtg
gagcggctgcgggagatcctgcgcacccacccgggggcgtcggaggtgcacctgaagctc
accgagcccggccgggcgacggtgatgcggctcgaggacacgctccgcgtcgagcggact
cccgccctgttcggcgacctcaaggcgctgctgggcccgagctgcctggtctga
DBGET
integrated database retrieval system
