Luteimicrobium xylanilyticum: KDY119_01522
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Entry
KDY119_01522 CDS
T06254
Symbol
recQ
Name
(GenBank) DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lxl
Luteimicrobium xylanilyticum
Pathway
lxl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lxl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDY119_01522 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lxl03019
]
KDY119_01522 (recQ)
03400 DNA repair and recombination proteins [BR:
lxl03400
]
KDY119_01522 (recQ)
Enzymes [BR:
lxl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KDY119_01522 (recQ)
Messenger RNA biogenesis [BR:
lxl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KDY119_01522 (recQ)
DNA repair and recombination proteins [BR:
lxl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KDY119_01522 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
MarR_2
Rrf2
Cas3-like_C_2
HEM4
DUF6432
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QFU98016
UniProt:
A0A5P9Q9T4
LinkDB
All DBs
Position
complement(1713916..1716117)
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AA seq
733 aa
AA seq
DB search
MNEPTTQPTPAAPTAPGTDRAGLREEAEGVLRALVGRDDVALREDQWRAIEALVADARRA
LVVQRTGWGKSAVYFVATALLRARGAGPTVLVSPLLALMRDQVGAARRAGIRAVTINSSN
VTEWDEIHAAIAAGEVDVLLCSPERLNNPGFRDGVLPRLAADAGLVVVDEAHCVSDWGHD
FRPDYRRIRTLLADLPAGIPVLATTATANARVVADVAEQLGVRADGTVPGPGADVLVLRG
ALDRESLHLAVVDLPDPSTRLAWLAEVLQDAPGSGIVYCLTVSQAEQVASQLRATGLAVA
AYTGQTDPAEREALEADLKENRVTALVATSALGMGFDKPDLAFVIHLGAPSSPIAYYQQV
GRAGRGVERAVVVLLPGTEDQRIWEYFDSLGFPPEPKVRVVLDTLASAPEGGPMSVAQLE
THVDLKRSRLEQMLKVLDVDGAVRRVQGGWVAAGRPWEYDADRYARVAETRADEQRAMVD
YERTTGCRMAFLRAVLDDPELQPGWRCGRCDRCGGVELPGAPDPDAVAEARHDLDRPGVE
IVARRQWPSGMDALGLDLRGRIDPDERAETGRAVARLDGLGWSGPLRDLFTPTTSDGETP
VPLRTAAVRVLDDWLVPDGAGTVDCVVGIRSATRPQLVAHLAGGLARYLGVPVAGSVGPV
VGREEPGSHDVNSAARLAGVVRRLGPDEGLDVTGKRVLLVDDRTDSGWTLTVVARALRRA
GATAVLPFVLAVG
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagccgacgacgcagcccacgcccgccgccccgaccgcccccggcaccgaccgc
gccggcctgcgcgaggaggccgagggcgtcctgcgtgcgctcgtcgggcgcgacgacgtg
gcgctgcgcgaggaccagtggcgcgcgatcgaggccctcgtcgcggacgcgcggcgcgcg
ctcgtcgtgcagcgcaccggctgggggaagtcggcggtctacttcgtcgcgaccgcgctg
ctgcgcgcccgcggcgccgggccgaccgtgctcgtctccccgctgctcgcgctcatgcgc
gaccaggtcggcgcggcgcggcgagcggggatccgggccgtgaccatcaactcctcgaac
gtcaccgagtgggacgagatccacgcggcgatcgccgcgggcgaggtcgacgtgctgctc
tgctcgcccgagcgcctcaacaacccggggttccgcgacggcgtccttccccggctggcc
gccgacgccgggctcgtggtggtcgacgaggcgcactgcgtctccgactggggccacgac
ttccggcccgactaccggcgcatccgcaccctgctcgccgacctgcccgcgggcatcccc
gtgctcgcgaccaccgcgaccgcgaacgcgcgggtcgtcgcggacgtcgccgagcagctc
ggcgtgcgcgcggacggcacggttccggggccgggagcggatgtcctggtgctgcgcggc
gcgctcgaccgcgagtcgctccacctggcggtcgtcgacctgcccgacccctcgacccgg
ctcgcgtggctcgccgaggtcctgcaggacgcgccgggctccgggatcgtctactgcctg
accgtgtcgcaggccgagcaggtcgcgagccagctccgcgcgaccggcctcgccgtcgcc
gcgtacacggggcagaccgaccccgccgagcgcgaggccctcgaggccgacctcaaggag
aaccgcgtcaccgcgctggtggcgaccagcgcgctcggcatgggcttcgacaagcccgac
ctggcgttcgtgatccacctcggggcaccgtcgtcgcccatcgcctactaccagcaggtc
gggcgagcgggacgcggggtggagcgggccgtcgtcgtgctgctgcccggcacggaggac
cagcgcatctgggagtacttcgactcgctcggcttcccgcccgagccgaaggtgcgcgtc
gtgctcgacacgctcgcctcggcacccgagggcgggccgatgtccgtcgcccagctcgag
acgcacgtcgacctcaagcgttcgcgcctcgagcagatgctcaaggtgctcgacgtcgac
ggcgcggtccggcgcgtccaaggcggctgggtcgcggccggacggccgtgggagtacgac
gccgaccggtacgcgcgggtggcggagacccgcgcggacgagcagcgggcgatggtcgac
tacgagcgcacgaccggctgccgcatggccttcctgcgcgcggtcctcgacgaccccgag
ctccagccggggtggcggtgcggccgctgcgaccggtgcggcggcgtcgagctcccgggc
gcgccggaccccgacgccgtggccgaggcacgccacgacctcgaccggcccggcgtcgag
atcgtcgcgcgccggcagtggcccagcggcatggacgcgctgggcctcgacctgcgcggg
cggatcgaccccgacgagcgcgccgagaccgggcgcgcggtcgcccgcctcgacggtctc
ggctggtccggcccgctgcgcgacctgttcacgcccacgacgtccgacggcgagacgccg
gtgccgctgcgcaccgcggccgtccgggtgctcgacgactggctggtgcccgacggcgcg
gggaccgtcgactgcgtcgtcgggatccgttcggcgacccgaccccagctcgtcgcgcac
ctcgcgggcgggctcgcccggtacctcggcgtgcccgtcgccgggtccgtcggtccggtc
gtcgggcgcgaggagcccggcagccacgacgtgaactccgccgcgcggctcgcgggcgtg
gtccggcgcctcggccccgacgaggggctcgacgtcaccggcaagcgcgtgctgctcgtc
gacgaccgcaccgactccggctggacgctgaccgtcgtggcgcgggcgctgcgccgcgct
ggcgccaccgcggtgctgccgttcgtgctcgcggtgggctga
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