Luteimicrobium xylanilyticum: KDY119_01542
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Entry
KDY119_01542 CDS
T06254
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic 3'-phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
lxl
Luteimicrobium xylanilyticum
Brite
KEGG Orthology (KO) [BR:
lxl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lxl03016
]
KDY119_01542 (thpR)
Enzymes [BR:
lxl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KDY119_01542 (thpR)
Transfer RNA biogenesis [BR:
lxl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KDY119_01542 (thpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QFU98036
UniProt:
A0A5P9Q9V9
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All DBs
Position
1730814..1731428
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AA seq
204 aa
AA seq
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MRLFAAVFPPDPVLDHLALALDAVGAGRTLPDAPDGRRGSPRWVPRDAQHLTLAFYADVP
EGAIPELSEALRDVARAAAPFELRLRGAGSFAGRVLWVGVDGATDALRELAEGALAASVR
EVPDDVRPHRAHLTVARARWGRSKVSRSRDAYRSQLDPAARALAVYAGPAWTVDGFSLVE
SRPGEGPQGGPLYRELERWAFAPS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgttcgcggcggtgttcccgcctgacccggtcctcgaccacctcgccctcgcg
ctcgacgcggtgggggcggggcgcaccctgcccgacgctcccgacggccgccgcgggtcg
ccccgctgggtgccgcgcgacgcgcagcacctgacgctcgcgttctacgcggacgtcccc
gagggcgcgatcccggagctgtcggaggcgctgcgggacgtcgcgcgcgcagccgcgccg
ttcgagctgcggctccgcggcgcgggctcgttcgcgggccgggtgctgtgggtcggcgtc
gacggcgccacggacgcgctccgtgagctggccgagggtgcccttgcggcgagcgtccgc
gaggtgcccgacgacgtccgcccgcaccgcgcccacctcaccgtggcccgggcccgatgg
ggcaggagcaaggtcagccggtcgcgcgacgcctaccgctctcagctcgatcctgcggcc
cgggcgctcgcggtctacgccggcccggcgtggacggtcgacgggttctcgctcgtcgag
tcgcgcccgggtgaggggccgcagggcggcccgctgtaccgcgagctggagcgctgggcg
ttcgccccctcctga
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