Luteimicrobium xylanilyticum: KDY119_01796
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Entry
KDY119_01796 CDS
T06254
Symbol
helY
Name
(GenBank) putative helicase HelY
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
lxl
Luteimicrobium xylanilyticum
Brite
KEGG Orthology (KO) [BR:
lxl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lxl03019
]
KDY119_01796 (helY)
Enzymes [BR:
lxl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KDY119_01796 (helY)
Messenger RNA biogenesis [BR:
lxl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KDY119_01796 (helY)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QFU98284
UniProt:
A0A5P9QA31
LinkDB
All DBs
Position
2006919..2009855
Genome browser
AA seq
978 aa
AA seq
DB search
MAAAPDRTTASHRRPDRPDPGETLSPAERYAASREREARRRARGDRAWPELEEFRELVGF
TLDDFQVRGCEALEEGRGVLVAAPTGAGKTVVGEFAVHLAVTSGRKAFYTTPIKALSNQK
YNDLVRRYGAERVGLLTGDTTINGEAPVVVMTTEVLRNMLYAGSRTLDGLAFVVMDEVHY
LADRFRGPVWEEVIIHLADDVQLVSLSATVSNAEEFGEWLEMVRGDTAVVVSEHRPVPLW
QHVLVGRGSGGGPAATPRLLDLYAGSVDPTDPGVNPPINPELMAVFRSARGPESDPRRGR
RGPGDRGYRGRGGGPRGGIGRRGAPRFAVVDALDEDGLLPAIYFIFSRAGCEDAVGQCLA
AGLRLTSPQEEAEIRLVVEERSATIPGEDLEVLGYHSWVEALARGIAAHHAGMLPLFKET
VEELFSRGLVKVVFATETLALGINMPARSVVLEKLVKWDGSQHVDVTPGEYTQLTGRAGR
RGIDVEGHAVVVDHHGLDPVALAGLASKRLYPLRSSFHPTYNMAVNLVAQVGRDRAREVL
ETSFAQFQADRGVVGLAKQAQAHAEALQGYEKAMTCDRGDFAEYLGIRRQISAREAELSR
AASANRRAEVAAAFEKLRTGDVVEVPSGRRAGYVVVVDRGRGGGFDGPSPTVLTSEGRAK
RLTLADAPAGIAVVGTVRVPKGFNARNARHRKDLVSSMRNALADGRTPPGAQRRGANRRG
RGSTAADDAELARLRAALRAHPCHSCPDRDDHARWGERYERLAGEHRALVRRIESRTGSI
AKVFDRTCDVLLELGYLAADEGRGPGELRVTRDGRWLRRLYAENDLLLAECLRRHAWDDL
DAAGLAAAVCGVVYDGRRDDGAEPYVPGGPDGRLARALEATTRIWSRLGDLEATHRIDAT
RRLDLGLVAAVHRWANGRRLDTVLQGSEIAAGDFVRWCKQVVDVLDQIAQAAPSSALRDT
ARDAQHAILRGVVAYSSV
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcccccgaccgcacgaccgcctcgcaccgccgtccggaccgccccgacccg
ggggagaccctgtctcccgcggagcgttacgcggcgtcccgtgagcgcgaggcccgccgg
cgggcacgcggcgaccgggcctggcccgagctcgaggagttccgcgagctggtcggcttc
acgctcgacgacttccaggtgcgcggctgcgaggccctcgaggaagggcgcggcgtgctc
gtcgcggcccccaccggggcgggcaagacggtcgtcggggagttcgccgtccacctggcc
gtgacgtccggacgcaaggcgttctacaccacccccatcaaggcgctgtcgaaccagaag
tacaacgacctggtccgccggtacggcgccgagcgggtgggcctgctgaccggggacacc
accatcaacggcgaggctcccgtggtcgtgatgaccaccgaggtgctccgcaacatgctg
tacgcgggctcgcgcacgctcgacgggctcgcgttcgtcgtgatggacgaggtgcactac
ctcgccgaccggttccgcggaccggtctgggaagaggtcatcatccacctcgccgacgac
gtccagctggtctccctgtcggcgaccgtgtccaacgccgaggagttcggcgagtggctc
gagatggtccggggcgacaccgccgtggtcgtctccgagcaccggccggtgccgctgtgg
cagcacgtgctcgtgggtcggggttcgggcgggggccccgcggcgacgccgcgcctgctg
gacctgtacgcgggctcggtggaccccaccgacccgggcgtgaacccgccgatcaacccc
gagctcatggcggtgttccggtccgcccgcggtccggagagcgacccgcggcgcggccgt
cgggggccgggggaccgcggctaccggggccgcgggggcggcccgcggggagggatcggc
cggcgcggggcgccgcgcttcgcggtcgtcgacgccctcgacgaggacggactcctgccc
gcgatctacttcatcttctcccgtgcgggctgcgaggacgccgtcgggcagtgcctcgcg
gccgggctgcggctgacctcgccgcaggaggaggccgagatccgcctcgtcgtggaggaa
cgctccgcgacgatccccggcgaggacctcgaggtcctcggctaccactcctgggtcgag
gcgctggcgcgcgggatcgccgcgcaccacgccggcatgctgccgctgttcaaggagacc
gtggaggagctgttcagccgcgggctcgtcaaggtcgtgttcgcgaccgagaccctggcg
ctggggatcaacatgcccgcgcgctcggtcgtcctggagaagctcgtcaagtgggacggc
tcgcagcacgtcgacgtcacgcccggggagtacacccagctcacggggcgcgcggggcgg
cgcgggatcgacgtcgaggggcacgcggtcgtcgtggaccaccacgggctcgaccccgtc
gccctcgccgggctggcgtccaagcgcctgtacccgctgcgctcgagcttccacccgacg
tacaacatggcggtcaacctcgtcgcgcaggtggggcgcgacagggcgcgcgaggtcctg
gagacgtcgttcgcccagttccaggccgaccgcggcgtcgtcgggctcgccaagcaggcc
caggcgcacgccgaggcgctgcagggttacgagaaggccatgacctgcgaccgcggcgac
ttcgcggagtacctcgggatccggcggcagatctcggcgcgcgaggccgagctgtcgcgg
gccgcgtccgcgaaccggcgcgccgaggtcgcggccgccttcgagaagctgcgcaccggg
gacgtggtcgaggtgccgtccgggcgccgcgcgggctacgtcgtggtggtggaccgcggc
cgcggcgggggcttcgacggccccagcccgacggtcctgacgagcgagggccgcgccaag
cggctcacgctcgccgacgcgcccgcgggcatcgccgtcgtcgggaccgtgcgcgtcccg
aagggcttcaacgcccgcaacgcccggcaccgcaaggacctcgtctcctcgatgcgcaac
gcgctcgccgacgggcgcaccccgcccggcgcgcagcggcggggcgcgaaccggcgcggc
cggggaagcacggccgccgacgacgccgagctcgcccgcctgcgcgcagcgctccgggcc
cacccgtgccactcctgccccgaccgcgacgaccacgcacgctggggcgagcgctacgag
cggctcgcaggcgagcaccgcgccctggtgcggcgcatcgagtcccgcaccgggtcgatc
gcgaaggtcttcgaccggacctgcgacgtgctcctcgagctcggctacctcgccgccgac
gagggtcgcggcccgggcgagctccgggtgacccgcgacgggcgctggttgcgccgcctg
tacgccgagaacgacctgctgctggccgagtgcctgcgccggcacgcgtgggacgacctg
gacgccgcggggctcgccgcggccgtctgcggggtcgtgtacgacggtcggcgcgacgac
ggcgccgagccgtacgtcccggggggcccggacgggcgcctggcccgtgcgctcgaggcg
acgacccggatctggtcgcgcctgggcgacctcgaggccacgcaccgcatcgacgcgacc
cgcaggctcgacctcgggctcgtcgccgccgtgcaccggtgggcgaacgggcgccggctc
gacacggtcctgcagggctccgagatcgcggccggcgacttcgtgcgctggtgcaagcag
gtcgtggacgtgctggaccagatcgcgcaggcagcgccgagctcggcgctgcgggacacc
gcccgcgacgcgcagcacgcgatcctgcggggcgtcgtggcgtactcgtccgtctga
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