Luteimicrobium xylanilyticum: KDY119_01907
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Entry
KDY119_01907 CDS
T06254
Symbol
pdxS
Name
(GenBank) Pyridoxal 5'-phosphate synthase (glutamine hydrolyzing)
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
lxl
Luteimicrobium xylanilyticum
Pathway
lxl00750
Vitamin B6 metabolism
lxl01100
Metabolic pathways
lxl01240
Biosynthesis of cofactors
Module
lxl_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
lxl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
KDY119_01907 (pdxS)
Enzymes [BR:
lxl01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
KDY119_01907 (pdxS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NanE
His_biosynth
NMO
IGPS
DHO_dh
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
QFU98395
UniProt:
A0A5P9QD37
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All DBs
Position
complement(2120235..2121182)
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AA seq
315 aa
AA seq
DB search
MSSAPSSSTPSPAPQNDQAASTAAVGTARVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGA
VAVMALERVPADIRAQGGVSRMSDPDMIDGIIAAVSIPVMAKARIGHFVEAQVLQSLGVD
YVDESEVLTPADYANHIDKWQFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSN
ATTHMRTIRAEIKRLTSLPEDELFVAAKELQAPYELVKEVAATGKLPVVMFTAGGIATPA
DAAMMMQLGAEGVFVGSGIFKSGNPAQRAAAIVKATTFYDDPDVIAKVSRGLGEAMVGIN
VDDIPVPHRLAERGW
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtctgcgccgtcctcttccaccccgtcgcccgccccgcagaacgaccaggcggcc
tccacggccgccgtcgggacggcccgcgtcaagcgcggcatggcggagatgctcaagggt
ggcgtcatcatggacgtcgtcacgcccgagcaggccaagatcgccgaagacgccggtgcc
gtcgccgtcatggccctcgagcgcgtgcccgcggacatccgtgcgcagggcggcgtctcg
cgcatgagcgaccccgacatgatcgacggcatcatcgccgccgtgtcgatccccgtcatg
gcgaaggcccgcatcggccacttcgtcgaggcgcaggtgctccagagcctcggcgtcgac
tacgtcgacgagtccgaggtgctgacgcccgccgactacgcgaaccacatcgacaagtgg
cagttcacggtgccgttcgtgtgcggcgcgaccaacctcggcgaggccctgcgacgcatc
accgagggcgcggccatgatccgctccaagggcgaggccggcaccggcgacgtctcgaac
gccaccacgcacatgcgcaccatccgtgccgagatcaagcgcctcacgtcccttcccgag
gacgagctgttcgtcgccgcgaaggagctccaggcgccgtacgagctcgtcaaggaggtc
gccgcgaccggcaagctccccgtcgtcatgttcaccgcgggaggcatcgcgactccggcg
gacgccgcgatgatgatgcagctcggtgccgagggcgtgttcgtcggctccggcatcttc
aagtcgggcaacccggcgcagcgcgcggccgcgatcgtcaaggcgaccacgttctacgac
gaccccgacgtcatcgccaaggtgtcgcgcggcctcggcgaggcgatggtcggcatcaac
gtcgacgacatccccgtcccgcaccgcctggccgagcgcggctggtga
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