Luteimicrobium xylanilyticum: KDY119_02088
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Entry
KDY119_02088 CDS
T06254
Name
(GenBank) DNA-directed DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lxl
Luteimicrobium xylanilyticum
Pathway
lxl03030
DNA replication
lxl03430
Mismatch repair
lxl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDY119_02088
03430 Mismatch repair
KDY119_02088
03440 Homologous recombination
KDY119_02088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxl03032
]
KDY119_02088
03400 DNA repair and recombination proteins [BR:
lxl03400
]
KDY119_02088
Enzymes [BR:
lxl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDY119_02088
DNA replication proteins [BR:
lxl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KDY119_02088
DNA repair and recombination proteins [BR:
lxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KDY119_02088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DUF7508
DEDDh_C
GST_C_8
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QFU98572
UniProt:
A0A5P9QBW9
LinkDB
All DBs
Position
2329381..2331252
Genome browser
AA seq
623 aa
AA seq
DB search
MSTTGTTAGTPRTTTLAAPGTTPQPPVAYQPTLDELGTPLQDVTFVVVDLETTGASAREG
GITEIGAVKVRGGEVLGEFQSLVDPGRPIPAFIARLTGITSAMVATAPTIDLVLPSFLEF
AHGAVLVAHNAPFDVGFLRAAARACAYEWPGYPVVDTVALARRVVTRDEAPNHKLATLAR
LFHAQVTPEHRALADARATVDVLHALLERHAAFGVTHLEDLENATDPVPPEVRRKRHLAD
GLPQAPGVYLFHAPDGEVLYVGTSSNLRSRVRQYFTAGEKRRRMTEMVRLAASVSVVVCG
TAFEASVRELRLIAEHEPRYNRRSKHPERMPWLRLTAEPHPRLSVVRDVRAEPDGTVAAH
VGPFASQTQAQAAAEAVTDTFALRTCTRRLPLVPAAGAASCVLADLGRCAAPCVDPGAAA
PYARTVEEVRRALLEDPSPVVEALARRMASLSAQQRYEQAQHVAERLESFCTGVERGARL
RALAACRQLVAARPADGGWELAVVRHARLAATARTAPADDAVAAVRALVATAEHVDPPVP
PAPAAHPHEAELVLGWLDQPGVRVVEVTDPLSLPVRLGSRAHHLARASRVVSAYDLGDGS
RPSPPPETPVPPVPAQPEEPAPC
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgacgggcaccacggccggcaccccacgcaccaccaccctggctgcccccggc
acgacccctcagcctcccgtcgcctaccagcccacgctcgacgagctcggaaccccgctg
caggacgtgacgttcgtcgtcgtcgacctcgagaccacgggcgcctcggcccgcgagggc
ggcatcacggagatcggggccgtgaaggtccgcggcggcgaggtgctcggcgagttccag
tcgctcgtcgaccccgggcggccgatccccgcgttcatcgcgcgtctcacggggatcacg
agcgcgatggttgcgaccgccccgaccatcgacctcgtgctcccgagcttcctggagttc
gcgcacggcgcggtgctcgtcgcgcacaacgccccgttcgacgtcggcttcctgcgcgct
gccgcgcgggcgtgcgcgtacgagtggccgggctacccggtggtcgacacggtcgcgctc
gcgcgccgcgtcgtgacccgggacgaggcccccaaccacaagctcgcgacgctcgcccgg
ctcttccacgcgcaggtcacgcccgagcaccgggcgttggccgacgcgcgggcgaccgtc
gacgtgctgcacgcgctcctcgagcggcacgcggcgttcggcgtgacccacctcgaggac
ctcgagaacgcgaccgaccccgtgccgcccgaggtccggcgcaagcgccacctcgccgac
ggtctgccccaggcgccgggcgtctacctcttccacgcgcccgacggcgaggtcctgtac
gtggggacgtcgagcaacctgcgctcgcgcgtccggcagtacttcacggccggtgagaag
cggcgccggatgaccgagatggtgcggctcgccgcgagcgtctcggtcgtggtgtgcggc
acggcgttcgaggcgtcggtgcgcgagctgcgcctgatcgcggagcacgagccgcgctac
aaccggcggtccaagcaccccgagcgcatgccgtggctgcgtctgaccgccgagccgcac
ccccgcctctcggtggtccgcgacgtgcgggccgagcccgacgggacggtcgcggcgcac
gtcggaccgttcgcgtcgcagacccaggcgcaggccgccgccgaggccgtgaccgacacg
ttcgcgctgcgcacgtgcacgcgccggctcccgctcgtcccggcggccggggccgcgtcg
tgcgtgctcgcggacctcggtcggtgcgccgcgccgtgcgtcgacccgggtgcggcggcg
ccctatgcgcggaccgtcgaggaggtccggcgcgccctgctcgaggacccgtcgcccgtg
gtggaggcgctcgcccggcgcatggcgtcgctgtcggcgcagcagcgctacgagcaggcc
cagcacgtggcggagcggctcgagtcgttctgcaccggcgtcgagcggggcgcgcgcctg
cgggctctcgctgcctgccgccagctcgtcgccgcccggcccgcggacggcgggtgggag
ctggccgtcgtccggcacgcccggctggcggccaccgcccgcaccgcgcccgccgacgac
gccgtcgccgccgtccgagccctcgtcgccactgcggagcacgtcgacccaccggtgccg
cccgccccggcggcgcacccccacgaagccgagctggtgctcgggtggctcgaccagccc
ggggtccgggtcgtcgaggtcaccgacccgttgagcctgccggtgcgcctcgggagccgg
gcgcaccacctggcccgggcgtcgcgggtcgtgtcggcctacgatctgggcgacgggtcc
cgcccgtctccgccgcccgagacaccggtaccccccgtgccggcccagcccgaggagcct
gccccatgctga
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