Luteimicrobium xylanilyticum: KDY119_02226
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Entry
KDY119_02226 CDS
T06254
Symbol
holA
Name
(GenBank) DNA-directed DNA polymerase
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lxl
Luteimicrobium xylanilyticum
Pathway
lxl03030
DNA replication
lxl03430
Mismatch repair
lxl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDY119_02226 (holA)
03430 Mismatch repair
KDY119_02226 (holA)
03440 Homologous recombination
KDY119_02226 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxl03032
]
KDY119_02226 (holA)
03400 DNA repair and recombination proteins [BR:
lxl03400
]
KDY119_02226 (holA)
Enzymes [BR:
lxl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDY119_02226 (holA)
DNA replication proteins [BR:
lxl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KDY119_02226 (holA)
DNA repair and recombination proteins [BR:
lxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KDY119_02226 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Peripla_BP_4
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QFU98707
UniProt:
A0A5P9QB96
LinkDB
All DBs
Position
complement(2469027..2469968)
Genome browser
AA seq
313 aa
AA seq
DB search
MILVSGPEGLLAERAVERAVALARESAGAEGLERTDVAGPTYEAGRLAVATSPSLFGEPR
VVVVDDAQLGTDALVTEVADYVAAPEPDVTLVVVHRGGQRGKRMLDAIKATGAPVVVCDA
LKRDSDKEDFVRAEFRAAGRRIDAEAVQGLVAALGSDLRELASSCSQLVADTTGTVTTAV
VDRYYGGRMEVTGFRVADAAAAGRAADAVTLLRHALASGVDPVVVVAALALKLRQLAKVA
ATRSAGGPRPQELGLAPWQLERARKELVRWTPEGLATAITAVARADEEVKGAGRDPVYSV
ERAVLTVARATSR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgatcctggtgagcggccctgaggggctcctcgcggagcgcgccgtcgagcgcgcggtc
gcgctggcccgcgagtccgcgggcgcggaggggctcgagcgtaccgacgtggccgggccc
acctacgaggcggggcggctcgcggtcgcgacgagcccgtcgctgttcggtgagccgcgc
gtcgtggtcgtcgacgacgcgcagctcggcaccgacgccctcgtcaccgaggtggccgac
tacgtcgccgcgcccgagcccgacgtgacgctcgtcgtcgtgcaccggggcggacagcgg
ggcaagcgcatgctcgacgcgatcaaggcgacgggtgcgcccgtcgtcgtctgcgacgct
ctcaagcgcgactccgacaaggaggacttcgtccgggccgagttccgtgcggccggccgg
cgcatcgacgcggaggccgtgcaggggctcgtcgccgcgctcggcagtgacctgcgtgag
ctcgcgtcctcgtgctcccagctcgtcgcggacaccaccgggaccgtcacgaccgccgtc
gtcgaccggtactacggcggccgcatggaggtcacggggttccgcgtcgccgacgccgcc
gcggccgggcgtgccgccgacgccgtgaccctcctgcggcacgcgctcgcatcaggggtg
gacccggtcgtcgtggtcgcggcccttgcgctcaagctgcgccagctcgccaaggtcgcc
gcgacacgcagcgccggcggaccgcgaccccaggagctcgggctcgcgccgtggcagctc
gagcgtgcgcgcaaggagctcgtccgctggacgcccgagggcctcgcgaccgcgatcacg
gccgtcgctcgggccgacgaggaggtcaagggagccggccgagacccggtctactccgtc
gagcgcgccgtgctcacggtggcgcgcgccacgagccgataa
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