Luteimicrobium xylanilyticum: KDY119_03488
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Entry
KDY119_03488 CDS
T06254
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lxl
Luteimicrobium xylanilyticum
Pathway
lxl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KDY119_03488 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxl03400
]
KDY119_03488 (alkA)
Enzymes [BR:
lxl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KDY119_03488 (alkA)
DNA repair and recombination proteins [BR:
lxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KDY119_03488 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
QFU99952
UniProt:
A0A5P9QFU3
LinkDB
All DBs
Position
complement(3890656..3891516)
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AA seq
286 aa
AA seq
DB search
MRREHTVDLDVRGPWSLATSRRFWEGFAPAALPEQADDGHLRTVFRVEGDWTRAEADVTQ
ETETTRVVVRGDGDLDAAAEQVARFLALDLDATTWPDVGRRDPVVGDVQERLPGLRPCGF
HSPYEAAAWAVLSQRVAVPQAARMRAGLVERHGDDGAFPAPARLRELAPGLDLPGRKAEY
LGAVADAALAGRLDTLALRALDPDEARREVAEIHGLGPFAADLVVLRGANVPDAVPTSER
RLRAIVAERYPGRDLDEVAGSWRPWRTWGSFHLRAAFTASLEARTA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgagacgcgagcacaccgttgacctcgacgtgcgcggcccgtggtcgctcgcgacgagt
cggcgcttctgggagggcttcgccccggcagccctcccggagcaggccgacgacgggcac
ctccgcaccgtgttccgcgtcgagggcgactggacgcgcgccgaggcggacgtcacccag
gagaccgagacgacccgtgtggtggtgcgcggcgacggtgacctcgacgcggccgcggag
caggtggcgcgcttcctcgcgctcgacctcgacgcgacgacctggccggacgtcggccgc
cgtgacccggtggtgggcgacgtccaggagcggctccccgggctgcggccgtgcgggttc
cactccccgtacgaggcggcggcgtgggcggtgctgtcccagcgtgtcgcggtgccgcag
gccgcgcggatgcgtgccgggctcgtcgagcgccacggcgacgacggcgcgttcccggcg
cccgcgcggctgcgcgagctggccccgggcctcgacctgccgggccgcaaggccgagtac
ctcggcgcggtcgcggacgcggcgctcgcgggtcgcctcgacacgctcgcgctgcgcgcc
ctggacccggacgaggcccgccgcgaggtcgccgagatccacggtctcggtcccttcgcg
gcggacctcgtcgtcctgcgcggcgcgaacgtgcccgatgcggtgccgacgtcggagcgc
cggctccgggcgatcgtcgccgagcgttacccgggacgcgacctcgacgaggtcgccggg
tcctggcgcccgtggcggacgtggggctcgttccacctgcgggcggcgttcaccgcctcc
ctggaagcccgaacagcgtga
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