Lysinibacillus xylanilyticus: ACQCPS_25250
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Entry
ACQCPS_25250 CDS
T11293
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lxn Lysinibacillus xylanilyticus
Pathway
lxn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lxn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACQCPS_25250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lxn03021
]
ACQCPS_25250
03400 DNA repair and recombination proteins [BR:
lxn03400
]
ACQCPS_25250
Enzymes [BR:
lxn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACQCPS_25250
Transcription machinery [BR:
lxn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACQCPS_25250
DNA repair and recombination proteins [BR:
lxn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACQCPS_25250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Dockerin_1
HHH_5
PASTA
DUF961
Motif
Other DBs
NCBI-ProteinID:
XSZ38347
LinkDB
All DBs
Position
complement(5181109..5182053)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISEDSKYGKFVVEPLERGYGNTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTVEGVVEDVASIILNVKKLALKIYSDEEKVIEIDVKGDGTVTAADITHDSDVEI
LNPDLYIATIAKNGHLRMRMYAQRGRGYTPADQNKREDLPIGVIPIDSIYTPVSRVNFQV
ENTRVGQSSDYDKLSLDVWTDGSIGPKEAISLGAKILTEHLNIFVGMTDEAQTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVLELANKSEDDMMKVRNLGRKSLEEVK
AKLEELGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaaaccaaagattgaaacggtggagatcagcgaagattccaaatat
ggaaagtttgttgtagaaccgcttgaacgcggatatggaaacactttgggtaattcttta
cgtcgtatccttctgtcttcattaccaggagctgctgtcacttcaattcaaattgacggt
gttcttcacgaattctcaactgtagaaggcgtagtagaagatgtagcttcaattattttg
aatgtgaaaaaactagctcttaaaatctactctgacgaagaaaaagttattgagattgat
gtaaaaggcgatggtacagttacagctgctgacattacacatgacagtgatgtagaaatt
ttaaacccggatctatatattgcaacaatcgctaaaaacggtcatttacgtatgcgtatg
tacgcacaacgcggccgtggttacactcctgctgatcaaaacaaacgtgaggatcttcct
atcggcgtgatcccgatcgactctatttacactccagtatcacgcgtcaatttccaagtg
gaaaatactcgtgtaggtcagtcttctgactacgataaactttctcttgatgtgtggaca
gatggtagcatcggtccgaaagaggcgatttcgctcggagcaaaaattttaaccgagcat
cttaacatcttcgttggcatgacagacgaggcacaaactgctgaaatcatggtcgaaaaa
gaagaagatcaaaaagaaaaagttttagagatgactatcgaagaacttgatctttctgtt
cgttcttacaactgcttaaaacgcgctggtattaacacagtactagaacttgcgaataag
tcagaagacgatatgatgaaagttcgtaaccttggacgtaagtcacttgaagaagtaaaa
gcgaagttagaagagcttggtttagggttacgcaaagaagactaa
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