Lactobacillus xylocopicola: KIM322_00060
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Entry
KIM322_00060 CDS
T09734
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lxo
Lactobacillus xylocopicola
Brite
KEGG Orthology (KO) [BR:
lxo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxo03032
]
KIM322_00060 (gyrA)
03400 DNA repair and recombination proteins [BR:
lxo03400
]
KIM322_00060 (gyrA)
Enzymes [BR:
lxo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KIM322_00060 (gyrA)
DNA replication proteins [BR:
lxo03032
]
Prokaryotic type
DNA Topoisomerases
KIM322_00060 (gyrA)
DNA repair and recombination proteins [BR:
lxo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KIM322_00060 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BDR59745
UniProt:
A0ABN6SHE5
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Position
6203..8704
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AA seq
833 aa
AA seq
DB search
MDNDNQGQDHRIRNVDLTNVMNSSFLDYAMSVIVARALPDVRDGLKPVQRRILYGMSELG
VTPDKQYKKSARIVGEVMGKFHPHGDSSIYLAMAHMAQDFSYRYMLVDGHGNFGSVDGDE
PAAMRYTEARMSKIAVEMLRDINKNTIDWQRNYDDSENEPVVLPARIPNLLVNGTSGIAV
GMTTNIPPHNLSEVIKGIHMLMNNPDITTKELMKAIPGPDFPTGGTIMGRGGIYRAYETG
RGNIVVRANTTIETEKSGRERIVVTELPYLVNKAELVKKIADLARSKTIDGITGVRDESD
QTGMRMTIDIRRDASASVVLNNLFKLTQMQANFGMNMVAIADGAPHFLTLKQMLEYYLEH
QEDVVTRRTKFELAKAEARAHILEGLKIALDHIDEIVHIIRQSESSDIAKAALISRFGLD
DKQSQAILDMRLVRLTGLERDKVEAEYKELQVKIADYKDILARHERINELIYEELLDIQK
RFGDERRTKIGDGEVISIEDEDLIEKQDVLLTLTHSGYIKRMLINEFKTQNRGGKGIKGM
GIKDGDFIEKLLYASTHDLVLFFTNRGKVYSKKAYEVPEFGRTAKGLPVVNLLQLEKGEK
IQTIITIPPDAAEHYLFFITRLGVVKRTKVSDFANIRNSGLIALTLRDGDELTNVLTTDG
RQDILIGTHLGYAVRFNEEAVRSMGRTAAGVRGINLRTDDYVVGSGVIKDTDEVLVVSEN
GYGKRTPASEYPVKGRGGKGIQTAKVTTKNGPLAGVTVIDGTQDIMVITNDGIMIRFKID
SVSQTGRSTIGVRLIKVGDDSKAASLAVVPVEEDQEVADDSAEVSETLDDPQE
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggataacgacaatcaaggtcaagatcatagaataagaaatgtcgacctgacgaacgta
atgaatagctcgtttttggattatgccatgtcggttatcgttgcgcgtgctctacccgat
gtgcgtgacggcttaaagccagttcagcggcgtattctctatggaatgagcgaactgggt
gttacgccggacaagcaatacaagaagtcagccagaattgtcggtgaagtcatgggtaaa
ttccacccccatggtgactcttcgatatacttggccatggcccatatggcccaagacttc
agctatcggtacatgttagttgatggtcatggtaactttgggtcagtcgatggtgacgaa
ccagccgcaatgcgttataccgaggcgcgaatgagcaaaatcgcggtcgagatgctgcgt
gacattaataaaaatacgattgactggcaacgtaactacgatgactctgagaatgagccg
gttgtcttaccggctagaatacctaatctgctagtcaacgggaccagcggaattgcggtc
ggaatgactactaacattccgcctcacaacctctctgaagtaattaaagggattcatatg
ctgatgaataacccggatattacaaccaaggaactaatgaaggccattcccggtcctgat
tttcccaccggtggtacgattatgggtcggggtggcatctaccgggcctatgaaacgggc
cggggcaacattgttgtgcgagctaacaccaccattgaaaccgaaaagagtggccgagaa
cggattgtcgtcactgagctgccttacttggtaaataaggctgaattggtgaagaagatt
gctgatttggccaggtctaaaacaattgatggcatcaccggggtgcgggatgagtctgac
cagacgggaatgcggatgaccattgatatccgccgggatgctagtgccagtgtggtgttg
aataacttattcaaactaacgcagatgcaggctaactttgggatgaatatggtggccatt
gcggatggcgcaccgcactttttgaccctgaagcaaatgctggaatattacttggaacat
caagaagatgtggtaacccgtagaaccaagttcgaactcgctaaggctgaggcccgggcg
cacatcttagaggggctgaagatagccctagaccatattgacgagattgttcatattatc
cgtcagagtgagtcaagtgacattgctaaggcagccctgatcagtcgctttggtctggat
gacaagcagtcacaggctatcttagacatgaggctggtacggctgactggcttggaacgg
gacaaggtagaagctgaatacaaggaactgcaggtcaaaattgctgattacaaggatatc
ttggcgcgccatgaacgaatcaatgagttgatttatgaggaattacttgatattcaaaag
cgttttggtgacgagcgccgaaccaagattggtgatggcgaagtgatttcaattgaagat
gaagatctgattgaaaagcaggacgtgctgctgaccctgacccacagtggctacattaag
cgcatgctgattaatgaatttaagacacagaaccgtggcggtaaaggtatcaagggcatg
gggattaaagacggcgacttcattgagaaattgctttatgcaagtacgcatgacctagtc
ctgttctttactaacaggggtaaagtctactccaaaaaagcctatgaagttcctgaattt
ggacgcacggccaaggggctaccggttgtcaacttgttacaacttgaaaaaggcgaaaaa
attcagacgattattacaattccgccagatgctgctgaacattacctcttcttcattacg
aggttaggagtagttaaacgaaccaaggtcagtgactttgccaatatccgcaacagcggt
ctaattgccctcactctgcgtgacggtgacgagctgaccaacgtcttaacgactgatggt
aggcaagatatcttgattggtacccacttaggatatgcggtgcgcttcaatgaagaagcg
gtgcgctcgatgggtagaacggctgctggggtacgcggcatcaacttgcggaccgacgat
tatgtggtcgggtccggtgtcatcaaggatactgatgaagttttggtggtttccgagaac
ggttacggtaaacggacacctgcgagtgaatatccggttaagggccgcggcggcaaaggc
atccagactgccaaggtgacgaccaagaacggaccgcttgccggggtaaccgtaattgac
ggaactcaggatatcatggttatcaccaatgatggcatcatgattcgcttcaagattgac
agtgtttcgcagactgggcgaagcacgattggggttcgtctgattaaagttggcgatgac
agcaaggccgcaagtttagccgttgttccggtggaagaagaccaggaagtggcagacgat
agcgcggaggttagtgaaaccttagacgatccacaagaataa
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