Lactobacillus xylocopicola: KIM322_00120
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Entry
KIM322_00120 CDS
T09734
Symbol
dnaB_1
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
lxo
Lactobacillus xylocopicola
Pathway
lxo03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lxo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KIM322_00120 (dnaB_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxo03032
]
KIM322_00120 (dnaB_1)
Enzymes [BR:
lxo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KIM322_00120 (dnaB_1)
DNA replication proteins [BR:
lxo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KIM322_00120 (dnaB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA
AAA_24
ParA
NACHT
GNA1162-like
Sp-DndD
nSTAND3
DUF6746
Motif
Other DBs
NCBI-ProteinID:
BDR59751
LinkDB
All DBs
Position
12827..14209
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AA seq
460 aa
AA seq
DB search
MDNIVSQQIPHDDEAEKAVLGAIFIDPEVIADASAEVQADDFYKKANQLIFQAMLNLSDR
GDAIDPLTLQDELTKQNQMDDIGGIAYVSELALATPTAAHVTYYAKIVHRKALLRRLISA
SQKIISNAMQDSDEVTDILDDAESEIMNVSSENNVNGFRGIKDIVNATIEEINNIPEDGN
MVTGLPTGFVELDKMTTGFHDDELIIVAARPGVGKTSFAMNIAQFVGLHTDQAVAVFSLE
MSGEQLVQRMLASEGLINSQHLRTGQLDEEEWSKLVIASGSLANADVYIDDTPGIKMSEI
RAQARRLAKEKGNLGLIVIDYLQLIEGPRSESRQQEVSAISRQLKKLAKEIHVPVIALSQ
LSRSVEQRQDKRPVLSDIRESGSIEQDADIVSFLYRDDYYRDEDEDGGGEHQEVDAEDDN
GEVEVIIEKNRSGSRGTVKLMFSKPYNRFSNLDYRHSQPG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggataatattgtctcgcaacaaataccgcatgatgatgaagcggaaaaagcggtttta
ggtgcaatttttattgatccagaggtaattgcggatgctagtgcggaagttcaagccgat
gatttctataaaaaagccaatcagttaatcttccaggcaatgctgaatttgtctgatcgc
ggggatgcaatcgatccgttgactctacaagatgagttaacgaagcagaatcaaatggat
gatattggtggtattgcctatgtgtctgagcttgctctggccacgccaaccgcggctcac
gttacttactacgccaaaatcgttcaccgaaaggcgcttttgcggcggcttatttcggct
agccaaaaaattatttctaatgcaatgcaggattccgatgaagtgactgacattcttgat
gacgccgagagcgaaatcatgaatgtttcttcggaaaacaatgtgaatggttttcgcgga
ataaaggatattgttaacgcaacaattgaagaaatcaacaatattccggaagacggcaac
atggtcacaggcttgcccacgggctttgtcgaactcgacaagatgacgactggtttccat
gatgacgagctgattattgtggctgcgcggcccggggttggtaaaacgtcctttgccatg
aatattgcccagtttgtcggcttacatactgatcaagcggtggcggtcttttcgctggaa
atgagcggtgaacagctggttcaacggatgcttgcctcagaagggctgattaactcccaa
cacctcaggacggggcagctggatgaagaagagtggagcaagctggtgattgcttcgggg
tcactggcgaacgctgatgtctacattgatgacacgccggggattaagatgagtgagatc
agggcccaggcccgccgcttagccaaagagaaggggaacttagggttaattgtaattgat
tacctgcagttaattgaaggaccacgcagcgagtcgcgccagcaagaagtctcggcgatt
tcgcggcaattaaaaaagttggccaaggaaattcacgttccggtaattgccctgtcccag
ttatcgcggtcggttgaacagcggcaagacaagcgcccagttctgtctgatattcgtgaa
tccggttcaattgagcaagatgccgacatcgtttcatttttgtatcgcgatgattattat
cgcgacgaagatgaagatggcggtggcgaacaccaggaagttgatgctgaagacgataat
ggtgaagttgaagtaattattgaaaagaaccggtcgggtagccgcggaaccgtcaagttg
atgttctccaagccctataaccgcttttccaaccttgattatcgtcatagtcagccgggt
taa
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