KEGG   Lactobacillus xylocopicola: KIM322_02310
Entry
KIM322_02310      CDS       T09734                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
lxo  Lactobacillus xylocopicola
Pathway
lxo00740  Riboflavin metabolism
lxo01100  Metabolic pathways
lxo01110  Biosynthesis of secondary metabolites
lxo01240  Biosynthesis of cofactors
lxo02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:lxo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    KIM322_02310 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KIM322_02310 (ribD)
Enzymes [BR:lxo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     KIM322_02310 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     KIM322_02310 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Bd3614-deam APOBEC_N SNAD4
Other DBs
NCBI-ProteinID: BDR59970
UniProt: A0ABM8BFI1
LinkDB
Position
231979..233025
AA seq 348 aa
MQDKDYMRMAVKEAVKAQGMTWTNPLVGAVIVKDGQVLATGYHHQYGREHAEVNALLHLT
KFEEARGATLYVTLEPCSHYGKQPPCCKKVAAAGIKRVIIGQVDPHEVVGGKGIKYLNEH
NVETEVIGGTEYLNEAYNFFYRQQRPLVTMKYAMSLDGKLNEAGNKRTMLTGEAAQDDVQ
QLRLRNQAILVGANTVRVDDPLLTVRIRPLPQLPIRIVLTRDANRLDLTKKIFKTPGPIW
LLSQTELTERHEENVRCFTAEKWTPAKIVQLLTDHNLQSLLVEGGSNVQAQFIAAALADE
VVAYIAPTLLGGSALPVAMGQEASQKVHYQVCDVQTLGPDVRLRARRE
NT seq 1047 nt   +upstreamnt  +downstreamnt
ttgcaagataaagattatatgcggatggctgtcaaagaagcagtgaaggcgcaaggcatg
acctggaccaaccccttggtgggagccgtgattgtcaaagacggtcaggtgctggccacc
ggctaccaccaccagtacgggcgtgaacacgcggaagttaatgcgctgttgcatttgacg
aagtttgaagaagcgcgtggcgcaacgctctatgttacgttggagccgtgcagccactac
ggcaagcagccgccttgctgtaagaaggtggctgcagccggcatcaagcgggtcattata
ggtcaggttgatccccacgaagttgtaggcggtaagggaattaaatatctcaatgaacat
aacgtggaaacggaagtaatcggtggcacggagtacttgaatgaggcgtataacttcttt
taccgtcagcaacggccactggtcaccatgaaatatgcaatgtcgcttgacggcaagctc
aatgaggctgggaacaagcgcacaatgttgacgggtgaggcggcacaagatgacgtgcag
cagttgcgcctgcgtaatcaggctatcttggtaggtgcaaacacggtgcgcgtggacgat
ccgctgctgacggtcaggattaggcccctgccgcaactgccaatcaggattgtgttaaca
cgtgatgccaaccgacttgatttgactaaaaaaatattcaagacgcctggccctatctgg
ctattgagtcaaaccgaactaacggaacggcacgaagaaaacgtgcgctgttttaccgct
gaaaaatggacgccagcgaaaattgtgcaattgttgaccgatcacaacctgcagtcgtta
ctggtagagggtggtagcaatgtgcaggcccagtttattgcagccgccttggctgatgag
gtggttgcttacattgcaccgacactgcttggtgggtcagcactgcccgtagcaatgggc
caggaagcatcacagaaggtgcattaccaagtatgtgatgtccaaactttgggtccagac
gtgcgccttcgcgcaaggagagaataa

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