Lactobacillus xylocopicola: KIM322_02570
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Entry
KIM322_02570 CDS
T09734
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lxo
Lactobacillus xylocopicola
Pathway
lxo03030
DNA replication
lxo03430
Mismatch repair
lxo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lxo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KIM322_02570
03430 Mismatch repair
KIM322_02570
03440 Homologous recombination
KIM322_02570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxo03032
]
KIM322_02570
03400 DNA repair and recombination proteins [BR:
lxo03400
]
KIM322_02570
Enzymes [BR:
lxo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KIM322_02570
DNA replication proteins [BR:
lxo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KIM322_02570
DNA repair and recombination proteins [BR:
lxo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KIM322_02570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
BRCT
DNA_pol_B_exo1
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
BDR59996
UniProt:
A0ABM8BFW9
LinkDB
All DBs
Position
265862..266815
Genome browser
AA seq
317 aa
AA seq
DB search
MSILIKNGVLHVSGAQAKIRGKGQERPGFITDYTLLDIETTGLSPYRDHVTELGAIKVRQ
NEVVAEYSKLVFYPRSNRVPAFITNLNGITEEQLLSEGIPVKDAIIEFRQFIADDIIIGY
NVNFDLNFLYDLTKKFKLPELKNDYVDVLRLARAYYPHQHNRLLDCLQRAGIAEVEEHHG
LADAIATKKVYDDFRGHFDEELLKQARAKVKNLDLLDKELEAWELGLHNPVANKKFVLAA
GLAMDKAEAALMVTNMGGLVQAMVQSDTDYLIMADQKFFSKNHPDWLQAQKYNQTGSKIK
RLSESYFLNMIAEWARN
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagtattttgattaaaaatggtgttttacacgtttctggcgctcaagccaaaattcgc
ggcaagggtcaggagcggcctggctttatcactgactataccctactagacattgaaaca
actggtctcagtccttaccgtgaccacgtcactgaacttggcgcgattaaggtccgtcag
aatgaggtggtagctgaatacagtaaactggtcttttatccgcggtctaaccgggtgcca
gccttcattaccaacttaaatgggattaccgaagagcaactccttagcgaaggaattccg
gtcaaagacgccataattgagtttcgtcaatttatcgctgatgatataattattggttat
aatgttaactttgacttgaattttttgtatgatttgaccaagaagttcaagttacctgag
ctcaaaaatgattacgttgatgtcttacgcttggcccgtgcttattatcctcaccagcac
aaccgtctgcttgactgtttgcagcgagcgggcattgctgaagttgaagaacatcatggc
ttagctgacgcgatcgctaccaaaaaggtttacgacgacttccgcggacactttgatgaa
gaactgcttaagcaagctcgcgccaaagttaagaacttggacttgctggataaagagctt
gaggcgtgggagcttggcttgcacaatccggtcgctaataagaaatttgttttagccgca
gggctcgcgatggacaaggccgaggcagcattaatggttaccaatatgggtggtttggtg
caagctatggtgcagtctgatacggattatctgattatggcagaccagaaattttttagc
aaaaaccaccctgactggttgcaggcccagaagtataaccaaactggtagtaagattaaa
cgactatctgaaagctattttttgaacatgattgctgaatgggcaaggaattaa
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