Lactobacillus xylocopicola: KIM322_02760
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Entry
KIM322_02760 CDS
T09734
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
lxo
Lactobacillus xylocopicola
Pathway
lxo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lxo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KIM322_02760 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lxo01007
]
KIM322_02760 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lxo03016
]
KIM322_02760 (serS)
Enzymes [BR:
lxo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
KIM322_02760 (serS)
Amino acid related enzymes [BR:
lxo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
KIM322_02760 (serS)
Transfer RNA biogenesis [BR:
lxo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
KIM322_02760 (serS)
Prokaryotic type
KIM322_02760 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF2203
CCDC160
Motif
Other DBs
NCBI-ProteinID:
BDR60015
UniProt:
A0ABM8BFI0
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All DBs
Position
286709..288016
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AA seq
435 aa
AA seq
DB search
MLDIKVIRENLPWAKEKLATRGIKPEELDELIKIDQERRAGLKRSEELKAQRNQVSKQIA
AAKRNQEDAGHAITEMREVGTQIKDLDDQVNELTNKQNDIILRLPNFPADSAPVGPDESY
NQKVRSWHEPAKLAFEPKAHWDIGTDLDILDWDRGAKASGARFVYYKGAGALLERAVFNF
FLDENTKAGYTEIIPPYLVNDESMQGTGQFPKFREDVYTIVDNDNPDQPRDLTLIPTAEV
PLVNYFRNEIIHDGKLPISVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKICKPEE
SWAELDKLTANAEDLLQKLNLPYRVVALATGDASFTSAKTYDLEVWMPYQDKYREISSCS
NCTDFQARRAQIRYRDEAGKPHLAHTLNGSGLAVGRTVAAILENYQNEDGTVTVPEALIP
YMNGMKQITKEASLI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgttagatattaaagtaattcgcgaaaatttgccgtgggccaaggagaagctggctacg
cgtgggattaagccagaggaactagatgaattaatcaagattgaccaagagcgacgcgca
ggtttgaagcgcagtgaagagctcaaagctcagcggaatcaggtctctaagcaaattgca
gcagctaaacgcaaccaagaagatgctgggcatgccatcacagaaatgcgtgaagtcgga
actcaaattaaagatttggatgatcaggttaatgaattaaccaacaagcagaacgatatc
atccttagactgccgaattttccggctgattcggcgccggttggtccagatgaaagttat
aaccagaaagttcgcagttggcatgaaccagctaagctcgcttttgaaccgaaagctcac
tgggacataggtaccgacttagatattctagactgggatcgtggtgctaaggcttccggt
gcgcgttttgtttattacaaaggtgcgggagccctgcttgaacgggcggtctttaacttt
ttcttagatgaaaatacgaaagctggttatactgaaataattccgccatatttagtcaac
gatgaatcgatgcaaggaacgggccaattcccaaaattccgtgaggatgtttatacgatt
gttgacaatgataatccggatcagccgcgagacctaaccctaatcccaactgctgaggta
ccgctggttaactatttcagaaatgaaattattcacgatggtaaactgccaattagcgta
actgcgctttcacctgcttttagaagtgaggctggctctgcgggccgtgatacacgtggc
ttgattagaatgcatgaatttcgaaaagttgaaatggttaaaatctgcaaaccagaagaa
tcttgggctgagttagataagctaacggcaaatgccgaagacttgctgcaaaaactcaac
ttgccgtatcgggtagttgcgcttgcaaccggggatgctagttttactagtgccaaaacc
tatgacctagaggtttggatgccttaccaggacaagtacagggaaatatctagctgttcc
aactgtaccgacttccaggcccggcgggcacaaattcgttaccgggatgaagcgggtaag
ccccacctagcccataccttaaatgggtcaggacttgcagttggccgaacggtcgccgct
attttagaaaattaccaaaatgaggatggtacggtaacggtacccgaagcgctaatacct
tacatgaatggaatgaagcaaattactaaggaagctagtttaatttaa
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