Lactobacillus xylocopicola: KIM322_04280
Help
Entry
KIM322_04280 CDS
T09734
Symbol
pcrA
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lxo
Lactobacillus xylocopicola
Pathway
lxo03420
Nucleotide excision repair
lxo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lxo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KIM322_04280 (pcrA)
03430 Mismatch repair
KIM322_04280 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxo03400
]
KIM322_04280 (pcrA)
Enzymes [BR:
lxo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KIM322_04280 (pcrA)
DNA repair and recombination proteins [BR:
lxo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KIM322_04280 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KIM322_04280 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
YMR265C_C
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
BDR60167
LinkDB
All DBs
Position
448592..450838
Genome browser
AA seq
748 aa
AA seq
DB search
MSEESILAGLNPQQQQAVKTTEGPLLVVAGAGSGKTSVLTRRIAYLVDEKEVLPWNILAI
TFTNKAASEMRERERKLLGDRASSIWMSTFHALCVRILRRDAEKIGYGSNFSIADAAEQL
TLVKHIERELNINPKMYEPRGILAAISNAKNDLLTPAAFEASSSSPFDKVAAEVYHEYQK
RLKHDQIMDFDDLIMQTLVLFKQDPTVLHYYQNKFRYLLVDEYQDTNQAQYELCHELAAQ
YKNICVVGDADQSIYGWRGANMENIMNFEQDYEQDGVQTVKLEQNYRSTGHILAAANAVI
KNNGNRKAKNLWTDQGDGAKITYYRAQSGDDEAHFIIAKIQEEVEANKHAYNDFAVLYRT
NAQSRTVEEAFVKSNVPYQIVGGHKFYDRKEIMDIMAYLKLVANPSDTMSFNRIVNVPKR
GIGQVSVDKFLTLAQDNNLSLLEAFNHLNMAGLSTRAAAKLSDFGAKLRDAIIFAKDHSV
TGLTEKILQDFGYTDALKAEHTIEAETRLENLDEFLSVTKRFDDEYEAEDDDASVLSDFL
AEVSLLSDQDDLANNDEQVTLMTLHAAKGLEFPVVFLVGMEDGLFPLSRALMEDDQLEEE
RRLAYVGITRAKSKLFLTNAYSRMMYGRMQNNPPSRFLEEIDQADLDAENAVVTSSVNNG
FQVQTAPFATADERARAQVYTSPQVKPAGAIGAEKKGWNVGDQVDHKAWGRGVVVKVNGQ
GEDMELDIAFKDKGIKRLLAAFAPIKQV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaatcgattttagcaggattaaacccgcaacagcaacaggccgttaagaca
accgaagggccattgcttgtcgtcgccggtgccggttcgggcaagacttcggttttgacc
cgccgcatcgcctacttagttgatgaaaaagaggtattgccgtggaatattttggccatt
acctttactaataaggctgctagcgaaatgcgggagcgggaacgaaagttactcggagac
cgtgctagcagcatctggatgtctacctttcatgccctgtgcgtgcggattttgcggcgt
gatgccgaaaaaattggctacgggagtaacttctcgattgcggatgcagcggagcaatta
acgctggttaaacatattgaacgggagctcaacattaacccgaagatgtacgaaccgcgg
ggtattctggcggcgatttccaatgctaaaaatgacttattaacacccgctgcctttgag
gccagcagttcttcgccgtttgacaaggtggccgctgaagtctatcacgagtatcaaaag
cggttgaagcatgaccaaatcatggattttgacgacttgattatgcaaactttagttttg
tttaagcaggatccaaccgtgctgcattattaccagaataagttccggtacttgcttgtt
gatgagtatcaagataccaaccaagcccaatatgaactgtgccatgaacttgctgctcag
tataagaatatctgtgtagtgggggatgccgaccagtcaatctatggctggcgcggtgcc
aacatggaaaatattatgaattttgagcaagattatgaacaggatggggtgcaaacggtt
aagctagagcagaattaccgctccacgggccatattcttgccgccgctaatgcggtaatt
aagaataacggtaaccgtaaggccaagaacctgtggactgaccagggtgatggcgcaaaa
atcacctattaccgggcccaaagcggtgatgatgaggcgcattttatcattgccaaaatt
caggaagaggttgaggccaataagcatgcttacaatgactttgccgtcctctatcggacc
aatgcccagtcgcgaacagttgaagaggcctttgtgaaatcaaatgtgccttatcagatt
gttggtggccataagttctatgaccgtaaggaaatcatggatattatggcttaccttaag
ttagtggctaatccaagcgatacaatgagttttaaccgcattgtcaatgtgcccaagcgg
ggcattgggcaggtcagtgtggataagtttttgactttggctcaggacaataacctgtct
ctattggaggcctttaatcatcttaatatggcaggtctatcgaccagggcagccgccaag
ctgagtgattttggcgctaaattgcgcgatgctattatctttgccaaagatcacagtgta
accggtttgactgaaaaaattctgcaggactttggttatacggatgcgcttaaggcagaa
cataccattgaagctgaaacaagattagaaaacctggatgaatttttgtcggtaaccaag
cggtttgatgatgaatatgaagcagaagacgatgacgccagcgtgctcagtgattttttg
gctgaggtttcgctattaagcgatcaagatgacctggctaataatgatgagcaagttacc
ttgatgactctacacgcggccaagggcttggaatttccagtggtctttttggtggggatg
gaagacgggctcttcccactgtcgcgggccttaatggaagacgaccagctcgaagaagaa
cgccgtcttgcctatgtcggcattacccgggctaaaagcaaactttttttgactaatgca
tattcgcgaatgatgtatggccgcatgcagaacaacccaccttcacgctttttggaggag
attgatcaggcggatctcgatgccgaaaatgcggtggtaaccagtagtgtcaataacggc
ttccaagttcagacggcgccgtttgctacggctgatgaacgggcccgggctcaagtttat
actagtccgcaggtaaagcctgctggtgcaatcggagctgagaagaagggctggaatgtt
ggtgaccaggttgaccataaggcctggggacgcggcgtggttgttaaagttaacggccaa
ggcgaagacatggagctcgatattgcctttaaggataaggggattaaacggcttctagca
gcctttgccccaattaaacaggtataa
DBGET
integrated database retrieval system
