Lactobacillus xylocopicola: KIM322_06400
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Entry
KIM322_06400 CDS
T09734
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
lxo
Lactobacillus xylocopicola
Pathway
lxo03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
lxo00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
KIM322_06400 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lxo03011
]
KIM322_06400 (rpsD)
Ribosome [BR:
lxo03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
KIM322_06400 (rpsD)
Bacteria
KIM322_06400 (rpsD)
Archaea
KIM322_06400 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BDR60379
LinkDB
All DBs
Position
complement(665674..666285)
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AA seq
203 aa
AA seq
DB search
MSRYTGPSWKRSRRLGISLSGTGKELSRRNYAPGQHGPNSRGRLSEYGEQLHEKQKLRWM
YGLNERQFRTLFKRAGKIRQGEHGTNFMVLLECRLDSLVYRLGFATTREQARQLVNHGHI
TVDGKRVDIPSYDVKVGQIIGLREKSKNLQQVKDALEAVVGRPSFVSFDDNKVEGSLVRL
PERDELEPEINEALVVEYYNKLL
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagatatacaggtccaagttggaaacgatcaagaagattaggtatctcactttca
ggtactggtaaagaacttagtcggcgtaactatgcgccaggtcaacacggccctaactca
cgcggtcgcctgtcagaatacggcgaacaattgcacgaaaagcagaagctgcgttggatg
tacggcctgaacgagcgtcaatttagaactttgttcaagcgggccggtaagattcgtcag
ggcgagcatggtaccaacttcatggttctgcttgaatgccgcctggacagcctggtttac
cgtcttggctttgccactactagagaacaagctagacaattagttaaccacggccatatt
actgttgatggcaagcgcgttgatattccttcatatgatgtcaaggttggtcaaatcatt
ggcctcagggaaaaatcaaagaacttgcaacaagtcaaagatgcacttgaagcagttgtg
ggccgcccatcatttgtttcatttgatgacaataaggtggaaggttctcttgtacgtctt
ccagaacgtgacgaactggaacctgaaattaacgaagccctagttgttgaatactacaac
aagctactttaa
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