Lactobacillus xylocopicola: KIM322_07730
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Entry
KIM322_07730 CDS
T09734
Symbol
rexB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lxo
Lactobacillus xylocopicola
Brite
KEGG Orthology (KO) [BR:
lxo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxo03400
]
KIM322_07730 (rexB)
Enzymes [BR:
lxo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KIM322_07730 (rexB)
DNA repair and recombination proteins [BR:
lxo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KIM322_07730 (rexB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BDR60512
LinkDB
All DBs
Position
complement(807545..811018)
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AA seq
1157 aa
AA seq
DB search
MIKILVGRQTDQLQEQVLQLAVTNYQQSPEQETFVIVPNHIKFTTEVRAISKLAVSQQQV
EQAVKNLQVLSFSRLAWFFLKDAPTSIPSQLDDAAAAMLLAKIIEQKRPELHLFKSANIS
PGLVKQLYETILEVRTGNLDLDDIDSEKLDLETKNKLADLKVIYDAFIAGIAGKFSTSNE
VQLQLNEYLASQPDLQHTDFYFSDFSHFTLQECLTIKLLMLHARSVTLAFKTQTGDINRD
PEPGDYDYVIQTTINQLLNYINQHKLPYQVETVPISPVLNQRERLNDFWTGISPAPSELN
QVQLVRADNRYAEAYFVARTIYQQVALQHYRYRDFLVLAPNLHEYETYLTPILRQNNIPF
FNDLEQEMKYHPLVVLIENIAQLATKPLQTQNLLTIMKTHLIIPKWYKDEAAYLQDVDQL
ENFVLAHGINHQLWQRDFTSFVAAKTIRLDQVPDQVAKINKLKNFFVKQVTDLLTKLAKE
KDTQQALTVFFNWLTQNGVPSSLEKWREAAQDQGDLQQARQSEQVWDLLINLLRDYLLIN
PAEFTSAEFFAVLVNGFKEATFSQIPSTLDAVDLSETGIVQVDGYKQVFILGATSNGLPQ
IQTTPGFLSTENLEQLSANFGEDAYLEDRQQLSNLDQNYQFGLSLALAQDQVYLSYAVAG
SENEAVEPSLYYERFKKAGAAEFCQHDLPEKRQELLSFLTNPEASLGYLTYLQRTDQNVA
VDALLKLTAERLPQKTALVLAGSQFINEPTDIGAPLAQQLYGENLNSSVSQLETFYGNSF
EYFLNYGLRLRKRFDNELDVIQAGNYFHETFDRLVKELSQRSLDLAEIDEPTLKQLLDLV
RGKMKAEARYQQLLTDPFNQFLFNCLDQTTTAVAGNWHQAVQKTPLRAKYAELSFGLGEQ
VTGLNFELPDLAGNHQVNLRGKMDRVDLAPVPEQKGVLAQVIDYKSSAQKFNLGLFYNGI
SLQMVSYLDVLAQNQDFFAGQQPLALLGAFYQTVTRQVERLNGKNLYASDLTLKQPSLDG
QARLKYTGLINNDQLRLLEAEPELKQPSSSSQLYAGISAKKDGSITVRGNAFNDDELKLL
LEYDEALIKGAASQILAGKIKLNPYQYGKAVNALAYSDYRDILFFDAMLKENQYHRIGNL
SKKELLAKIKAKLGKDE
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaattttagtcggtcgacagaccgaccagctgcaagaacaagttttgcaactg
gcggttacaaattatcagcagtcaccagaacaagaaacttttgtcattgtccctaatcac
attaagtttaccacagaagtacgggcaataagcaaactagccgtcagccagcagcaggtt
gagcaagcggtaaaaaatttacaggttctgtctttttcgcggctggcctggttcttttta
aaagatgctcccaccagcatccccagtcagcttgacgatgccgctgcggccatgctactt
gctaaaataatcgagcaaaagcgacctgaattacatctttttaagagtgccaatattagt
cctggtctcgtaaagcagctttatgaaacgattttagaagttcgtacgggtaatcttgac
cttgatgacattgactccgaaaagctggatcttgaaaccaagaataagctggccgatttg
aaggtgatttatgatgcctttattgctggcattgcgggtaaattctccacttctaatgaa
gttcaactgcagctaaacgaatatttagctagtcaaccagacttacagcacaccgacttt
tattttagcgatttttcacactttaccctgcaagaatgcttaacgatcaagctacttatg
cttcatgcccgcagcgttacgctggcttttaaaacccaaaccggtgatatcaaccgggac
cctgaaccaggcgactacgattacgttattcagacgaccatcaaccaactgcttaactac
ataaaccagcataagttgccatatcaggtagaaacggtgccaatctcacctgtacttaac
cagcgtgaacgactgaatgacttctggaccggcattagcccggcaccaagtgaactgaat
caggtgcaactagttcgagcagataaccgctatgctgaagcctacttcgttgcccgcacc
atttaccagcaggtagcattacagcattatcgctaccgcgactttttggtcttagcgcct
aatttacatgagtacgaaacctatttgacaccgatcttgcggcaaaataacattcctttt
ttcaatgatctagagcaggaaatgaagtaccatcccctggtagtcttaattgaaaacatt
gcccaactagcaaccaagccgttacagacgcaaaatctcttaacaattatgaaaactcac
ctgatcattcctaaatggtacaaggatgaggctgcctacctccaagatgtcgatcaattg
gagaattttgtcttggcccacggtattaaccatcagctctggcagcgcgactttacgtcc
tttgttgctgccaaaacgattcgccttgatcaggttcctgatcaggtggccaaaatcaac
aagttaaaaaatttctttgtcaagcaggttacggacctcctaaccaagttagctaaggaa
aaggacacccagcaggctcttactgttttctttaactggttaacgcaaaacggcgtgcca
agcagcttagaaaaatggcgtgaagccgcccaagatcagggcgatttgcagcaagcacgc
cagtccgagcaggtctgggacttgttaattaacctcttgcgtgattacctcttgatcaac
ccagctgaatttacttccgctgaattttttgctgtgctggttaatggctttaaggaagcc
actttttcacaaatcccgtccactttagatgccgttgatctttccgaaactggaattgtg
caagttgatggctataagcaagtttttattctgggggcgaccagtaatggtctaccgcaa
attcagactacccctggcttcttaagtacagaaaacctggaacaattgagtgcgaacttc
ggcgaggatgcttaccttgaagaccggcagcaactcagtaacctagaccagaactaccaa
ttcggcttatcgctggccctggctcaagaccaggtttatttgtcttatgccgttgctggt
agcgaaaatgaggccgttgagccgtcactttactatgaacgctttaaaaaggctggggca
gcggaattttgtcaacatgacttaccggaaaaacggcaagagctattatcatttttgact
aatcctgaagcgagcctaggttatctgacctatctgcaacggactgaccagaatgttgca
gtcgacgctttgctcaagctgacagcggaacggctgccgcaaaaaacggccttagtgctg
gccggcagtcaatttattaatgaaccaacagatatcggggcgcctttggcccagcaacta
tacggggaaaacctcaattcatcagtctcacagcttgaaaccttctatggcaactccttt
gagtactttttgaactatgggttacgtttgcggaagcgctttgataatgaactcgatgtt
attcaggctggtaattactttcacgaaaccttcgaccggctggttaaggaactcagccag
cgctcacttgatctagcagaaattgatgaaccaaccctcaagcaactgctggacctggta
cgcggtaaaatgaaagcagaagctagataccagcaactactgactgatccgtttaaccaa
tttttatttaactgtttggatcagacaaccacagctgtagcagggaactggcaccaagcg
gtgcaaaaaactccgctccgggccaagtatgccgagctgagctttggcctgggtgagcag
gtaaccggactaaacttcgaattgcccgacctggccggcaaccaccaagtcaacctgcgc
ggtaaaatggaccgggttgacctggctccggtaccagagcaaaaaggggtattggcccaa
gtgattgactataaatcttcggcacaaaaattcaaccttggactattttataacggaata
tccttgcagatggtgtcatatcttgatgtgctggcgcaaaaccaggactttttcgctggt
caacagccactggcgttactcggcgccttttaccaaacggttacgcgccaggttgagcgt
ttgaacggcaagaatctttatgcaagtgatcttaccctcaagcaacctagcttggatggt
caagcgcggctgaagtacaccggtttaattaataatgaccaattaaggttgctcgaagcg
gagccggaattaaagcagcctagttcgtcctcacaactttatgctggcattagcgctaaa
aaggatggcagcataactgttcgagggaacgccttcaatgacgatgagcttaaactcttg
ctggaatacgatgaagctttgattaaaggtgcagcgagccagattctcgcgggcaaaatc
aagcttaacccttatcaatacggcaaggcggttaatgcactagcttattctgattaccgc
gatattttattttttgatgccatgcttaaagagaatcaataccaccgtatcggcaatctt
agtaaaaaggaattactagccaagatcaaagcaaaattaggaaaagatgaataa
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integrated database retrieval system
