Lactobacillus xylocopicola: KIM322_08090
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Entry
KIM322_08090 CDS
T09734
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
lxo
Lactobacillus xylocopicola
Pathway
lxo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lxo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KIM322_08090 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lxo01007
]
KIM322_08090 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lxo03016
]
KIM322_08090 (aspS)
03029 Mitochondrial biogenesis [BR:
lxo03029
]
KIM322_08090 (aspS)
Enzymes [BR:
lxo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
KIM322_08090 (aspS)
Amino acid related enzymes [BR:
lxo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KIM322_08090 (aspS)
Transfer RNA biogenesis [BR:
lxo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
KIM322_08090 (aspS)
Prokaryotic type
Other AARSs
KIM322_08090 (aspS)
Mitochondrial biogenesis [BR:
lxo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
KIM322_08090 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
tRNA_anti-like
Motif
Other DBs
NCBI-ProteinID:
BDR60548
LinkDB
All DBs
Position
complement(842287..844134)
Genome browser
AA seq
615 aa
AA seq
DB search
MEKRTDYCGNITAQYLDQEVNLYGWVQRIRNLGNLLFIDLRDREGLVQVVVNHDSGPELM
TLAESLGSEDVIQVKGTVVKRASANPDMKTGEVEVTADDITVLNKSQNPPFEIKNDAEVG
EQLRLKYRYLDLRRPALQQAIMLRAKILRATHEFFDENGFINIETPILGKSSPEGARDYL
VPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDLETS
FTDEQQVQDYTEGLLKKIMKDVMDIDLKTPIARISWTDAMNKYGTDKPDTRFGMEIHDLS
PVFKDSDFKVFAGAIANGGFVKGIAVKDGAKAYSRKQIEKKQDYIKRYHAKGLAWVKYEA
GEFSGPVARFLTAANKSALLAEFGLEGGELLVFVADKWKVCCDSLDYLRRTFAKETGIIP
KNVFDFVWVVDWPLFEYDEGFGRWIAAHHPFTMPDDEGIKLLETDPHQAHARSYDIVMNG
DELGGGSIRIHKRSIQEKMLKALGFSKKRAYEQFGYLLEALDMGFPPHAGLAIGLDRFAM
LLAEKDNIRDVLAFPKNANAAEPMMHAPAPVTDQQLSDLGIEIESKYQDSVVKTNASLEK
QAEEEYGTNTDWDEK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagaacagactactgcggtaatattactgctcaataccttgatcaagaagtt
aatttgtatggttgggtgcaacgaattcgcaatttgggcaaccttctctttatcgacctg
cgtgaccgtgaagggctagtacaggtagtggtgaaccatgattcaggccctgaattaatg
accttagcggaatccttagggagtgaggacgttattcaggttaaggggacggtagtgaag
cgggccagtgccaatccagacatgaaaaccggtgaagtcgaagtgaccgctgacgatatc
acggttttaaataagtcgcagaatccgccctttgaaatcaagaacgatgccgaagtaggt
gaacaattacggttgaaataccgctaccttgacctgcggcgtcctgcactacaacaggca
attatgttgcgggcaaaaatcttgcgcgccactcacgaattcttcgatgaaaatggcttt
atcaatattgaaactccgattctcggcaagtcatcaccagaaggtgcgcgggactatctg
gtaccatcacgaatttatcctggcagtttttatgctctgccgcagtcaccccaattattt
aagcaattgctcatgggagcaggctttgacaaatactaccagctggcccggtgcttccgc
gacgaggacttgcggggcgaccgccaacctgaatttacccagattgatttggagacatcc
tttactgatgagcagcaggtgcaggattacactgagggtctcttgaaaaaaatcatgaag
gatgtcatggacattgatctcaaaacgccaattgcccgtatttcttggaccgatgcgatg
aacaagtacggtacggacaagccggatacccggtttgggatggaaatacatgatctgagt
ccagttttcaaggacagtgactttaaagtcttcgctggtgcgattgcaaacggcggtttt
gtcaaagggattgccgttaaggatggggcaaaagcatactcgcgtaagcaaattgaaaag
aagcaggactacattaagcgataccacgccaaggggcttgcctgggttaagtatgaagcg
ggagaattttcggggccggttgcccgctttttaactgctgctaacaagtcagcgttgctg
gccgaatttggccttgagggcggtgaattgctggtctttgtggctgacaagtggaaagtt
tgttgcgattcactcgattatctgcgccggacatttgccaaggaaacggggattattcct
aaaaatgtctttgactttgtctgggtggttgattggccgctctttgagtatgatgagggc
tttggcagatggatcgcagcgcaccatcctttcaccatgccggatgacgaggggatcaag
cttcttgaaaccgatccgcaccaagcccatgcccgcagctatgacatcgtcatgaacgga
gatgagcttggcggggggtcaatccggatccacaagcggtcaatccaggaaaagatgctt
aaagcactgggcttctctaagaaacgggcttatgagcaatttggttatctgcttgaggca
ctggacatgggctttccaccacatgctggtttagcaattgggctcgatcgttttgctatg
ttgctagccgaaaaggataacatccgcgatgttctagcctttcctaagaatgccaatgca
gctgaaccaatgatgcacgctccggccccggtaacggaccagcagctgtccgacctgggt
attgagattgagagtaagtatcaagatagtgtggttaagaccaatgccagcctagaaaag
caggcagaagaggaatatggaactaacactgattgggacgaaaaataa
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