Lactobacillus xylocopicola: KIM322_10100
Help
Entry
KIM322_10100 CDS
T09734
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lxo
Lactobacillus xylocopicola
Pathway
lxo03030
DNA replication
lxo03410
Base excision repair
lxo03420
Nucleotide excision repair
lxo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lxo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KIM322_10100 (polA)
03410 Base excision repair
KIM322_10100 (polA)
03420 Nucleotide excision repair
KIM322_10100 (polA)
03440 Homologous recombination
KIM322_10100 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxo03032
]
KIM322_10100 (polA)
03400 DNA repair and recombination proteins [BR:
lxo03400
]
KIM322_10100 (polA)
Enzymes [BR:
lxo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KIM322_10100 (polA)
DNA replication proteins [BR:
lxo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KIM322_10100 (polA)
DNA repair and recombination proteins [BR:
lxo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KIM322_10100 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KIM322_10100 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
Polysacc_deac_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
BDR60749
LinkDB
All DBs
Position
complement(1057806..1060481)
Genome browser
AA seq
891 aa
AA seq
DB search
MADQKLLLIDGNSIAFRAFYALYRQLENFKNSEGLHTNAIYTFKNMLDVLLAEVKPNHIL
VAFDAGKTTFRTAMYGEYKGGRQKTPPELLEQLPYIQELLHDLGISTYELENYEADDIIG
TFARLGEEKDFKVTVVTGDKDLTQLATSKTTVMVTKSGVMNLENYTPEHMKEVNGVTPTQ
FIDMKALMGDNSDNYPGVTKVGPKTASQLIQKYGSLENLYDHIDEMKESKLKENLRNDRD
QAFLAQKLATIERATPVTIGLKELKKRKPDYQKLRRFYEKMNFQKFLGELDPAGDNAGAT
QAKTKTVKVDYTELTENNLAAIKPAEKQPISFYLGLLGANYHLADFVGFAIKTQAGIFVS
RDVNLLKTTGLKRLLEDDQLKKNVFDLKRTVVGLHRLGIEAGGIDYDMLLASYLINNENN
SDDLGEVCRMYGENSVKSDYAVYGKGKSVKIPEDDQVLFNHLAGKVKALAELKPTLLDQL
KEHEQDDLYASIEIPVARVLATMEISGIKVEAATLSELQNEFAVELKELKRKIYQEAGEE
FNLNSPKQLGHILFEKMGLPPIKKTKTGYSTSVDVLHQLQDQSPIIAQILTYRQIAKIQS
TYVNGLLDVIQPDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPSQAD
GYIFSCDYSQIELRVLAQVSGDEQMQEAFRTGYDIHAHTAMKIFGLKSPDEVTPLMRRRA
KAVNFGIVYGISDYGLSKNLNISRQQAKEFIDNYFAQYPQIKEYMDKAVQVAREKGYAET
IMHRRRYLPDIHAKNFNVRSFAERTAINSPIQGSAADIIKIAMINMQKKLDDLQLKSKMV
VQVHDELIFDVPKEELATIKEIVPQVMQAAVQLDVPLVADSGYGHNWFDAK
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcaaaaattacttttaatcgatggtaattccattgcctttcgggctttttat
gcgttgtatcgccaacttgagaattttaaaaattccgaaggcttgcatactaatgctatt
tatacttttaaaaatatgcttgacgtgttgctcgctgaggttaaacccaaccatattttg
gtggcttttgatgctggtaagacaacctttagaacggccatgtacggcgaatataagggc
ggccgccagaagaccccgccagaattgcttgagcagttaccgtatattcaagaattactc
catgatctcggtatttcaacctatgaactggaaaactatgaggctgacgatattattggc
acttttgccagattaggtgaagaaaaagactttaaggtcacagttgtgaccggcgataag
gacctgacccagcttgccacgagcaagacgacagttatggtaactaagtcgggtgtgatg
aacttagaaaactatacgcctgagcatatgaaagaagttaatggggttacccctacccag
tttattgacatgaaagcactcatgggtgataactcggataactatccgggcgtaactaaa
gttggccccaagacggcctcacagctaatccagaagtatgggtcgcttgaaaatctctat
gaccatattgatgaaatgaaagaatccaagctgaaggagaacttgcgcaatgatcgcgat
caggcttttttggcccaaaagctggccacaattgagcgggctacaccggttacaattggt
cttaaggagcttaagaagcgcaagccagactaccagaagttgcgtcgtttttatgaaaag
atgaactttcaaaagtttcttggtgaattggatccggcaggtgataatgcaggcgcaacc
caggcaaagacgaaaacagtgaaagttgattataccgaattaaccgaaaataatcttgct
gcaattaagccagctgaaaaacagccaattagtttttaccttggcctactgggtgctaat
taccacttggccgactttgttggctttgccatcaaaacgcaagctggaatctttgttagc
cgggatgtaaatctgttaaagacaactggattaaagcggctattggaagatgatcagctt
aaaaagaacgtcttcgacttgaaacggacggtagttgggttacaccggctaggaattgaa
gctggcgggattgattatgacatgctcctggcttcgtacttaattaataatgaaaataat
tctgatgacctgggtgaagtttgccggatgtacggtgaaaattcggtcaaaagcgattac
gcggtctatggtaagggcaagagtgtcaaaattccagaagatgaccaggtcttgttcaac
cacttggccggtaaggttaaagcactagcagaattaaaaccgaccttgctagatcaactt
aaagaacacgagcaagatgacttatatgccagtatcgaaattcccgttgcgcgagtatta
gcaactatggaaatcagcggtattaaggttgaggcggcaactttaagcgagttgcaaaat
gaatttgcggtggagcttaaagagttaaagcgtaaaatttatcaggaggctggcgaagag
ttcaacctcaattcccctaaacaactaggacacatcctgtttgaaaaaatgggcctcccc
ccgattaaaaaaactaagacaggttactcgacttcagttgacgttttgcaccaactgcag
gaccaaagcccgattattgcccaaatcttgacttaccggcaaatcgctaagattcagtca
acttatgtcaatggcctcttagacgtcattcaaccagatggacgggtgcatacccgctac
ctgcaaactttgactgcaactggccgcttatcgtcagttgatcctaacttgcagaacatt
ccaaccagaactgaagagggtaagcaaattagaaaggcctttgtaccaagtcaggctgat
ggctatatcttttcctgcgactattctcagattgaattgcgggttttggcccaggtttca
ggggatgagcagatgcaagaggcctttagaaccggctatgatattcatgctcatacggcc
atgaagattttcggcttaaagtcaccggacgaggttacgccattgatgcggcgacgtgct
aaggcagttaactttgggattgtctatggcatttcggattacggcttgtccaaaaatctt
aatatcagtcggcagcaagccaaagagtttattgataattatttcgcccaatatccgcaa
atcaaggaatacatggataaggcggttcaagtagcgcgagaaaagggctatgccgaaaca
attatgcaccggcgccggtacttgccagatatccatgccaagaattttaatgtgcgttca
tttgcagaacgaacagcaattaattcgccaatccagggatcagctgctgatattatcaaa
attgcgatgatcaacatgcaaaagaagttggacgacctgcagctgaagagcaaaatggtg
gtgcaggtgcatgatgaattgatttttgatgtacctaaagaagagctggctacaattaag
gaaattgtaccgcaagtgatgcaggcagcggtgcagctcgatgttccactagtagcggat
tcaggttatggtcataattggttcgatgcaaagtaa
DBGET
integrated database retrieval system
