Lactobacillus xylocopicola: KIM322_10240
Help
Entry
KIM322_10240 CDS
T09734
Symbol
pbpF
Name
(GenBank) penicillin-binding protein
KO
K12555
penicillin-binding protein 2A [EC:
2.4.99.28
3.4.16.4
]
Organism
lxo
Lactobacillus xylocopicola
Pathway
lxo00550
Peptidoglycan biosynthesis
lxo01100
Metabolic pathways
lxo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
lxo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KIM322_10240 (pbpF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KIM322_10240 (pbpF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lxo01003
]
KIM322_10240 (pbpF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lxo01011
]
KIM322_10240 (pbpF)
Enzymes [BR:
lxo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
KIM322_10240 (pbpF)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KIM322_10240 (pbpF)
Glycosyltransferases [BR:
lxo01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
KIM322_10240 (pbpF)
Peptidoglycan biosynthesis and degradation proteins [BR:
lxo01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
KIM322_10240 (pbpF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
BDR60763
LinkDB
All DBs
Position
complement(1072719..1074776)
Genome browser
AA seq
685 aa
AA seq
DB search
MQNNEPNKNGLRSLWRRFDNRFFIGRWIILILLSTTLLVCTYYTVKVKTSNISNLKASLS
RTTGIYDYKAQKAGSLYSQKGTFVEYNKISPNVKNAVISTEDRTFWKNPGFSVKGMGRAA
LGLMLHRGQIAGGGSTITQQLAKNALLTQQQTFSRKIEELFFAVEINHVYSKKDILTMYL
NKAYFGNGVWGVQDASHKYFGKNASELTVGEGATLAAILRNPSKYNPIDHLNYSLSRRNL
VLDLMVANQKLAPQQAKVVKTQGLDIRDTYHNKDGYRYPYFFDAVVDEAIKRYGLKEEDV
MNKGLKIYTTLNQNYQSQLQQKFEQDWLFPQNAADGTKTQGASVVMDPETGAVRAVVGGR
GKHVFRGYNRATQMKRQPGSSIKPIVTYAPALQQGYHYDSQLSNKLQRFGKNGYEPHNVD
NGYSDKIPMYTALAQSKNVPAVWLLDRIGISKGVQSANNFGLKVPSEDQNLALALGGLST
GVSPLQMARSYAAFANKGNLPNSSYFITKITDASGNVIAENHDRGQHRIISESTAREMTT
MLLGVFTGGTGTAAQPAGYQVAGKTGSTEVPNSYGFGTKDQWIVGYTPDVVVATWVGFDR
TNKDHFMHGISETEITRLYKAEMEGILPYTAQNKFSEQPPQQIIKNNGAGSDWTKGIGGE
IKKGIGSAGEKLNEWYNNVKGLLGH
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataatgaaccaaataaaaacgggttacgcagcctttggcggcgcttcgataac
cgttttttcatcgggcgctggattattttaatcttgctcagcacaacacttttggtttgt
acttattataccgttaaagtaaagacttccaacatttccaacttgaaagcatcgctttca
agaacaacgggcatttacgactataaggcccaaaaagcgggatcgctgtactcgcaaaaa
ggaacttttgtcgaatataataaaatttcgcctaatgtcaaaaatgcggttatttcaact
gaagaccggacattttggaaaaatccgggttttagtgtcaaaggtatggggcgcgcagct
ttagggttgatgcttcatcgcggtcagattgctggtggtggctcgaccattacccagcag
cttgccaaaaacgccctgctaacccagcaacagactttttcacggaaaatcgaagagctt
ttttttgcggttgaaattaatcacgtttattcaaaaaaagacattttgaccatgtacctt
aacaaggcctattttggcaatggggtgtggggggttcaagatgccagccataagtatttt
ggcaaaaatgcctccgagttaactgtcggtgaaggggctactttggccgctattttgcgt
aatcccagcaagtataacccaattgaccatctgaactattcactgtctcgccgcaatctg
gttttggacttgatggtggccaaccaaaaacttgcgccgcaacaggcgaaagtggttaaa
acgcaagggctcgatattcgtgatacttaccataataaggatggttaccgctacccatac
ttttttgacgcggtcgttgatgaggcgattaagcgctatggacttaaagaagaagacgtc
atgaacaaggggttgaaaatttatacgaccttgaaccagaattatcagagtcagcttcaa
cagaagtttgagcaggactggttattcccgcagaatgcagctgacggaaccaagactcaa
ggggccagcgtggtgatggatccggaaactggggctgtgcgggcagttgttggtggacgt
ggcaagcatgtctttcggggttataaccgggctacgcagatgaagcggcagcccggctcg
tcaattaagccaattgtgacctatgctccggcactccaacagggctaccactatgattca
caactgtctaacaagctccaacggtttggtaaaaatggctacgagccccataacgttgat
aacggctattccgataaaattccgatgtatacagctctggctcagagtaaaaatgtacca
gccgtttggctgttagaccgcattggcatttctaaaggggtacagtctgccaataacttt
ggcttgaaagtaccaagcgaggatcaaaaccttgcgctggccttgggcggcttatcgacg
ggggtatctcctttgcagatggcgcggtcatatgcggcctttgccaacaagggcaacttg
ccgaatagttcctactttattaccaagattactgatgctagcggtaatgtgattgcagaa
aaccatgaccggggtcaacaccgaattatttcggaaagtacggctagggaaatgaccacg
atgctcttgggagtctttactggtggtaccggtacggccgctcaaccggctggctatcag
gttgctggtaagaccggctcaacggaagtgcccaattcgtatggctttggtacaaaagac
cagtggattgtcgggtatacaccagatgttgttgttgctacgtgggttggctttgaccgg
actaacaaagatcacttcatgcatggtatttccgaaacggagattacccggctctacaag
gctgagatggaggggatattgccatatactgcccagaataagtttagtgaacaaccacca
caacaaattatcaaaaataacggtgctgggtctgattggactaaaggaattggtggtgag
atcaaaaaagggatcggttccgcgggtgaaaaactgaatgaatggtataataacgtcaaa
ggacttttaggtcattaa
DBGET
integrated database retrieval system
