Lactobacillus xylocopicola: KIM322_10640
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Entry
KIM322_10640 CDS
T09734
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lxo
Lactobacillus xylocopicola
Pathway
lxo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lxo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KIM322_10640 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lxo03019
]
KIM322_10640 (groL)
03110 Chaperones and folding catalysts [BR:
lxo03110
]
KIM322_10640 (groL)
03029 Mitochondrial biogenesis [BR:
lxo03029
]
KIM322_10640 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lxo04147
]
KIM322_10640 (groL)
Enzymes [BR:
lxo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KIM322_10640 (groL)
Messenger RNA biogenesis [BR:
lxo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KIM322_10640 (groL)
Chaperones and folding catalysts [BR:
lxo03110
]
Heat shock proteins
HSP60 / Chaperonin
KIM322_10640 (groL)
Mitochondrial biogenesis [BR:
lxo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KIM322_10640 (groL)
Exosome [BR:
lxo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KIM322_10640 (groL)
Exosomal proteins of other body fluids (saliva and urine)
KIM322_10640 (groL)
Exosomal proteins of breast cancer cells
KIM322_10640 (groL)
Exosomal proteins of colorectal cancer cells
KIM322_10640 (groL)
Exosomal proteins of bladder cancer cells
KIM322_10640 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CCDC138_cc
Motif
Other DBs
NCBI-ProteinID:
BDR60803
UniProt:
A0ABM8BI61
LinkDB
All DBs
Position
complement(1124746..1126371)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKDIKFSEKARRSLLKGVDQLANTVKATIGPKGRNVVLEQSYGNPDITNDGVTIAKAIE
LKDHYENMGAKLVAEAAQKTNDIAGDGTTTAVVLTQAIVREGMKNVTAGANPVGVRRGIE
KATKAVVDELHKISHTVSSKDQIAQVASVSSASKEVGDLIADAMEKVGNDGVITIEDSRG
IETELSVVEGMQFDRGYLSQYMVTDNDKMEADLESPYVLITDKKISNIQDILPLLQEIVQ
QGKSLLIIADDVSGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKEQLQDIAALTGGTVIT
EDLGLELKDTKLDQLGQARRITITKDSTTIVDGAGSDEAIKEREDSIRKQIEETTSDFDK
KKLQERLAKLTGGVAVIHVGAATETELKERRYRIEDALNSTRAAVDEGYVAGGGTALINV
MGVVRDLKGDNDDEQTGINIVLKALAAPVRQIAENAGEDGSVILNKLESQAKEVGYNAAD
GEWENMVEAGIIDPTKVTRTALQNAASIAALLLTTEAVVAEIPEDKPAADPAAAAGAPGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaattttcagaaaaagcaagacgttctttattaaagggtgttgac
cagttggcaaataccgttaaggctacgattggccctaagggtagaaacgttgtcttggag
caatcttatggtaacccggatattactaacgatggtgtaacgattgccaaggcgattgaa
ctgaaagaccactatgagaatatgggtgctaagctggtggctgaagcagctcagaagact
aacgatattgccggtgacggtactacgactgctgttgttttgacccaagcaatcgtgcgc
gaagggatgaagaacgtaactgccggtgccaacccagttggcgtgcggcgcggaattgag
aaggccactaaagcagttgtggacgaattacacaaaattagccacacggtttcttcaaag
gatcaaattgcccaagttgcttccgtttcctcagcttccaaggaagtcggtgacctaatc
gctgatgccatggaaaaggtgggtaatgacggcgttattaccattgaggactcacgggga
atcgaaactgaattgtcagtggttgaaggaatgcagtttgaccgcggctacctgtcacaa
tacatggtaaccgacaacgataagatggaagctgacttagaaagtccttacgtcttaatt
accgacaagaagatttctaatatccaagacatcttgccacttttgcaagagatcgttcaa
caaggtaagtcactgcttattattgctgatgatgtgtcgggcgaagcactgcctacttta
gttttgaacaagattcgtggtactttcaacgtcgttgccgttaaggctccaggttttggc
gaccggcgcaaggaacaactgcaagatattgctgccttaactggtggtacggttatcacc
gaagacctcggccttgaactcaaggacactaagcttgaccaattgggtcaagcacgtcgc
atcacgattaccaaggattcaacgaccattgttgatggtgctggttcggatgaagcaatt
aaggagcgggaagattcaattagaaagcaaattgaagaaaccacttcagacttcgacaag
aagaagctgcaagaacgtttagctaagttgactggtggggtagcagttattcacgttggt
gctgctactgaaactgaacttaaggaacgtcgctaccgcatcgaagatgctctgaactct
acccgtgcagctgttgatgaaggttacgttgctggtggtggtactgctctaattaacgtg
atgggtgttgttagagaccttaagggtgacaatgacgatgaacagactgggattaatatc
gtacttaaggctttggctgccccagttcggcaaattgctgaaaatgctggtgaagatggt
tccgtcatcttgaacaagcttgaaagtcaagccaaagaagttggttacaatgccgctgat
ggcgaatgggaaaacatggttgaggccggtatcatcgacccaactaaagttacccggacc
gctctgcaaaacgccgcttcgattgctgccttgctgctaacaactgaagctgtcgttgcc
gaaattccagaagataaaccggctgctgatcctgccgctgctgcaggtgctcctggcatg
atgtag
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