Lactobacillus xylocopicola: KIM322_10820
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Entry
KIM322_10820 CDS
T09734
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lxo
Lactobacillus xylocopicola
Pathway
lxo03030
DNA replication
lxo03430
Mismatch repair
lxo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lxo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KIM322_10820
03430 Mismatch repair
KIM322_10820
03440 Homologous recombination
KIM322_10820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxo03032
]
KIM322_10820
03400 DNA repair and recombination proteins [BR:
lxo03400
]
KIM322_10820
Enzymes [BR:
lxo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KIM322_10820
DNA replication proteins [BR:
lxo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KIM322_10820
DNA repair and recombination proteins [BR:
lxo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KIM322_10820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_5
RuvB_N
DNA_pol3_gamma3
AAA_22
TIP49
AAA_30
AAA_19
AAA_2
AAA_assoc_2
AAA_16
AAA_7
AAA_24
AAA_14
Sigma54_activat
RCF1-5-like_lid
Mg_chelatase
Rad17
AAA_18
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
BDR60821
LinkDB
All DBs
Position
complement(1138481..1140286)
Genome browser
AA seq
601 aa
AA seq
DB search
MAYQALYRKWRPRTFDSVVGQEDITNTLKNAIKRGTISHAFLFAGPRGTGKTSCAKIFAK
ALNCTNLQDGEPCNECANCQAADKGAMADIMEIDAASNNGVDEIREIRDKVKYAPTQGKY
KVYIIDEVHMLSLGAFNALLKTLEEPPEHVVFILATTELQKVPATIISRTQRYNFKRISA
SKLQERMQYILDQEKVKYDDQALAVIAQVADGGMRDALSILDQLLSYETDRVEYRAALEI
TGFAAKEKIEQILLALLHRDTSGALTLAQSQLQEGASSKNILTELIDLATQALLAVKTGG
QTERKFLNEDFFSKVADIPPERYFGLIAAANTALGNLRYTNQQQIPLEVFLVESTTPLAN
TPAAAANKPGEKPGADDLQAEVTALKKQVVDLTTKFTAWGKQHGKSSEQIFHLDDHSSSP
VKQTRPVKQADKAASSPQRVKNAPRQDQQNRKQVYHVLENATKQDLQAIKAVWPDLQSVL
AVSQRALLDVLEPVAASPDQVVMKCKYALWFEKASSDDDLLAILTEQIAKFAQHEYEIVL
VPDKDWFTVRQEFLQTHREELRSKSKTSATDEKQSEVNNDNDNEVVQQAKDLFGDTVNVK
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagcgttataccgcaagtggcggccacgaacctttgacagtgtcgttggt
caggaagatattaccaatacgctaaagaacgcaattaagcgtggcacgatttcgcatgca
tttttgtttgccggaccgcgtgggacgggcaagacttcgtgtgctaagatttttgctaaa
gccctgaactgcactaacctgcaagatggtgagccttgcaatgagtgtgccaactgtcag
gcggcggacaagggtgcaatggcggacattatggagatcgatgcggcttccaataatggg
gtagatgagattcgggaaattcgcgacaaagtcaagtacgcgccgacccaaggaaaatac
aaggtctatattattgacgaggtgcacatgctctcgctgggagccttcaatgccctactc
aaaacattggaagagccgcccgaacacgttgttttcattttagcgacaacggaattacag
aaggtgccagcgacgattatttcgcggacgcagcgctacaacttcaaacgtatcagtgcg
agcaaactgcaggaacggatgcaatatatcttggatcaggaaaaggttaagtatgatgac
caggccttggccgtaattgctcaggtagccgatggcgggatgcgggatgcgttaagtatc
ctggaccaactgctaagttacgaaacagaccgggttgagtatagagccgccttggaaata
accggttttgccgcaaaagaaaaaattgaacaaattttgctggcacttttgcatcgggat
accagtggggccctgacccttgctcaaagtcagttgcaggagggggccagctccaagaac
atcttgactgaacttattgacttagccacccaggccttgctagctgttaaaaccggcggt
caaactgaacgtaagtttttaaatgaggatttttttagcaaggtggcggatataccgcca
gaacgctattttggtctgattgcagcagctaatacggccttgggcaatttgcgctatact
aaccagcagcagattcccttagaggtgtttctggttgaaagcaccacccccttagcaaat
acaccggcagcagcggccaacaaaccaggtgaaaaaccgggagctgacgacttacaagct
gaagtgacggccttgaaaaagcaagtagttgatttgaccaccaagtttacggcttggggt
aagcagcacggaaaaagcagtgagcagatctttcatctcgacgaccatagttcaagtccg
gtcaaacagactaggccagttaagcaggcggataaggcggctagttcgccccaacgggtc
aaaaacgccccccgtcaagatcagcaaaatcgcaagcaggtctatcatgtattggaaaat
gcaaccaaacaagacttgcaggctattaaagcagtctggccagacctgcagtctgttttg
gctgtttcacaacgggccctgcttgatgtgcttgaaccggtagcggcgagccctgatcaa
gtagtgatgaaatgcaagtatgccctctggtttgaaaaggccagttctgatgatgatctg
ctggcaattttaactgaacaaattgccaaatttgcccagcatgaatacgaaattgtgctg
gttcctgataaggattggttcacggtccgccaggagttcttgcaaacccatcgcgaagaa
ctaaggagcaagagcaagacgagtgcaactgacgaaaagcagtcagaagttaacaatgac
aatgacaacgaagttgtgcagcaggctaaagacctctttggcgatactgtcaacgttaag
gattaa
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