Lactobacillus xylocopicola: KIM322_11030
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Entry
KIM322_11030 CDS
T09734
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lxo
Lactobacillus xylocopicola
Brite
KEGG Orthology (KO) [BR:
lxo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxo03400
]
KIM322_11030 (radA)
DNA repair and recombination proteins [BR:
lxo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KIM322_11030 (radA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
AAA
Lon_C
AAA_14
AAA_16
SLFN-g3_helicase
GvpD_P-loop
AAA_22
AAA_24
DUF7129
nSTAND3
RecA_N
nSTAND_NTPase5
NACHT
ABC_tran
NTPase_1
HEM4
RUBY_RBDX
ATPase_2
RuvB_N
NB-ARC
RNA_helicase
NPHP3_N
AAA_19
B12-binding
AAA_5
KdpD
MCM
GIDA_C_1st
Oxidored_nitro
CbiA
Motif
Other DBs
NCBI-ProteinID:
BDR60842
UniProt:
A0ABM8BHS0
LinkDB
All DBs
Position
complement(1155998..1157374)
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AA seq
458 aa
AA seq
DB search
MAKLKTKYKCRSCGYISASYLGRCPNCGAWNQFEKETEAVANRSSKGSPSRLIKKTGVSE
PVKLEDVKAEKEERIQTSMGELNRVLGGGIVPGSLVLVGGDPGIGKSTLMLQIMSDLSTK
HKVLYVSGEESANQIKLRASRLGLEASDMLLYPETDMEDIRQQIEELQPDFVVIDSIQTM
NEPSLDSMTGSASQVREVTSELMKMAKLDAITIFVIGHVTKEGAIAGPKILEHMVDTVLY
FEGDEHHAYRILHSVKNRFGAANEIGMFEMVHQGLQEVTNPSAIFLDERLPQSTGSAIVV
SLEGTRPILAEIQALVTPTAFGYAKRTTSGLDYNRAALLLAVLEKRGNLMLQNQDVYLTA
TGGIRLGEPAVDLAVVMAIASSYKNQEISPTDCFVGEVGLTGEVRRVNQVDSRIKEAAKT
GFKRIFIPKHNMRASLTQLGIEVIPVASIPQALKLVLG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcttaaaaccaagtacaagtgccgctcatgtggctatatctcggccagctac
ctcggccgctgtcctaactgcggtgcttggaaccagtttgaaaaagagacagaggccgtt
gcgaaccggtcgagcaagggcagccctagtcgcctaattaagaagacgggcgtaagtgaa
ccagtcaagctagaagatgtgaaagcagaaaaagaagaacgcattcagacctcgatgggc
gagctaaaccgagtcttaggtggtggtatcgtgcccggctcgctggttttggtgggcgga
gatcccggtattggcaagtctaccttgatgctgcagattatgagtgacttgtcgaccaag
cacaaagtgctatatgtttcgggcgaagagtcagccaatcagattaagctgcgcgccagc
cggctgggtcttgaagctagtgatatgttgctctatcctgaaacggacatggaggatatt
cggcaacagattgaggagctgcagccagattttgtggtaatcgattcgattcaaacaatg
aatgagcctagtctggactcgatgacgggctcggcttcgcaggtacgtgaagttaccagt
gaactgatgaaaatggccaagctggatgccattacaatctttgtcattggacacgtcacc
aaggaaggggccattgcagggccgaagattctagaacacatggtggatacggtactctac
tttgagggtgatgaacaccatgcttatcgtatcctgcattcggttaagaatcgttttggg
gcggccaatgaaattgggatgtttgagatggttcaccaggggctgcaggaggttaccaat
ccatcagccatctttctagatgagcgtttgccgcagtcaacggggtcggcgattgttgtt
tctttagaagggacgcggcccatcctggcggaaatccaagcgttagttacgccgaccgcc
tttggctatgccaagcgtactacctctgggctcgactacaaccgggccgcgctgctgctt
gcggttttggagaagcggggcaatctcatgctacaaaaccaagacgtctatttgaccgct
actggtggtattcgcttgggcgagccagcggttgatttggcggtggtgatggccatcgct
tccagttataaaaaccaagaaatctcaccgactgattgctttgtcggtgaagtgggcttg
accggtgaggttcgccgtgtcaaccaggtggattcccgcattaaggaggccgctaagacc
ggtttcaaacgaattttcattcctaagcacaacatgcgggccagtcttacgcagctgggg
atcgaggtaattccggtggcaagcattccgcaggcgctgaaactggttttgggctaa
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