Lactobacillus xylocopicola: KIM322_11370
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Entry
KIM322_11370 CDS
T09734
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lxo
Lactobacillus xylocopicola
Brite
KEGG Orthology (KO) [BR:
lxo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lxo03016
]
KIM322_11370 (truA)
Enzymes [BR:
lxo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KIM322_11370 (truA)
Transfer RNA biogenesis [BR:
lxo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KIM322_11370 (truA)
Prokaryotic type
KIM322_11370 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BDR60876
LinkDB
All DBs
Position
complement(1238877..1239662)
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AA seq
261 aa
AA seq
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MTTRYKMTLAYDGHLFHGFQSQPGQRTVQGTIEAALTKMTKGKVVLVEGSGRTDAGVHAL
GQVIHFDYPGAKIPPERMLFALNSIMPLDIAFRQSEIVDESFHVRYNAKGKWYRYRVSLD
HFVDPFKRFYSGHYPYPVDLVKMQIAARDLVGTHDFTSFTASGGQIKNKVRTMYYVNVKK
DDTANELIFDFICSGFLYNMVRILVAMLLEIGNGKRPRDDIPRVIAACDREQVRETAQAS
GLFLYHVFYGEIPQKYRQDLE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaagatataaaatgacccttgcgtatgacggtcatctttttcatggctttcag
tcccagccaggacaacgaacggttcagggaacaattgaggcagcactgactaagatgact
aaggggaaagttgttctggtcgaaggatctgggcgtaccgatgctggtgtacatgctttg
gggcaggttattcactttgattatccgggcgcaaaaatccctccagaacgaatgcttttt
gcgcttaattcgatcatgccactagatattgcttttaggcaaagtgagattgtagatgaa
tccttccatgtgcgttataacgctaagggaaagtggtatcgctaccgcgtaagtcttgat
cactttgttgatccgtttaaacgtttttatagcgggcattatccttacccagtagaccta
gttaagatgcagattgcggcgcgcgacctggtgggcacacatgactttaccagtttcacc
gctagtggcggtcagatcaaaaacaaagtgcggacaatgtactacgtcaacgtaaaaaaa
gacgatacagctaatgagttgatttttgattttatttgctcaggctttttgtataacatg
gtccgtattctggttgcaatgttgcttgaaattggtaatgggaagcgcccgcgagatgat
attccccgggtaattgccgcgtgtgaccgcgagcaggtaagggagacggcgcaagctagc
ggcttatttctataccatgttttttatggtgaaatcccccaaaaatatcgtcaagatctt
gaataa
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