Lentzea xerophila: ACRSBM_05160
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Entry
ACRSBM_05160 CDS
T11210
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lxr Lentzea xerophila
Brite
KEGG Orthology (KO) [BR:
lxr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lxr03016
]
ACRSBM_05160 (truB)
Enzymes [BR:
lxr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACRSBM_05160 (truB)
Transfer RNA biogenesis [BR:
lxr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACRSBM_05160 (truB)
Prokaryotic type
ACRSBM_05160 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
XWW36008
LinkDB
All DBs
Position
1040473..1041360
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AA seq
295 aa
AA seq
DB search
MKPSVAPGLVVVDKPDGMTSHDVVARVRRILGTRKVGHAGTLDPMATGVLVLGIERATKL
LGHLALDSKAYLAAIVLGASTTTDDAEGEILSTVDASDVTDDAIAAEIAKLTGPIQQVPS
AVSAVKIDGKRAYARVRAGEQVDIPARPVTVHRFDVLFSRREDKNVLIDVMVECSSGTYV
RALARDLGAALGVGGHLGALRRTRVGPFDLRVARTLAQLEETPGLSLDLDAAVATAFPRR
EIDPQEASALSHGQRLRAGGIEGTYGVFGPDGHVIALAKDEGTACKPVVVLSPAG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccctctgttgcaccgggcctggtcgtcgtcgacaagccggacggcatgacctcg
cacgacgtggtggcgcgtgtgcgcaggatcctcggcacccgcaaggtcgggcacgccggc
acgctcgacccgatggcgaccggcgtgctcgtgctcggcatcgagcgcgcgacgaagctc
ctcggccatctcgccctggacagcaaggcctacttggcggcgatcgtgctcggcgcgtcc
accaccacggacgacgccgagggcgagatcttgtccactgtggacgcctctgacgtgacc
gacgacgcgatcgccgccgagatcgcgaagctgaccggcccgatccagcaggtgccgtcc
gccgtgtccgcggtgaagatcgacggcaagcgcgcgtacgcccgcgtccgtgccggtgaa
caggtcgacatccccgcacggccggtgaccgtgcatcggttcgacgtgctgttctcgcgc
cgtgaggacaagaacgtgctgatcgacgtgatggtcgagtgctcgtccggcacctacgtc
cgcgcgctggcccgcgacctcggtgccgcgctgggcgtcggcgggcacctgggggcgttg
cggcgcaccagggtcggcccgttcgacctgcgggtggccaggaccctcgcccagctggag
gagacgccgggcctgtcgctggacctcgacgccgcggtcgccacggcgttcccgcgccgc
gagatagaccctcaggaggcctcggcgctctcgcacgggcagcggttgcgcgcgggcggg
atcgaggggacctacggggtgttcgggccggacgggcacgtcatcgcgctggccaaggac
gagggcaccgcgtgcaaaccggtggtcgtgctgagcccggccgggtga
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