Lentzea xerophila: ACRSBM_05185
Help
Entry
ACRSBM_05185 CDS
T11210
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lxr Lentzea xerophila
Pathway
lxr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lxr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACRSBM_05185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lxr03019
]
ACRSBM_05185
03016 Transfer RNA biogenesis [BR:
lxr03016
]
ACRSBM_05185
Enzymes [BR:
lxr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACRSBM_05185
Messenger RNA biogenesis [BR:
lxr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACRSBM_05185
Transfer RNA biogenesis [BR:
lxr03016
]
Prokaryotic type
tRNA degradation factors
ACRSBM_05185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
S1_RRP5
KH_PNO1_2nd
OB_cyt-4
Motif
Other DBs
NCBI-ProteinID:
XWW36012
LinkDB
All DBs
Position
1044004..1046256
Genome browser
AA seq
750 aa
AA seq
DB search
MTDIEVHEATAVIDNGKFGSRSIRFETGRLARQAAGSVVAYLDDETMLLSATTASKHPKE
HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQ
VVITVMSLNPKDLYDVVAINAASASTQLAGLPFSGPIGGVRVALIEGQWVAFPTYEQLEK
AVFDMVVAGRVVSSGDVAIMMVEAEATDNVIDMIAEGATAPTEEVVAAGLEAAKPFIKVL
CEAQAQLAQVAAKATGEYPTYPAYQADAFEAVEASASGELAQALTIAGKAERESKLDEVK
AATLEKLAEQFEGREKEVGAAFRSLTKKLVRQRILRDNVRIDGRGLTDIRDLGAEVAVIP
RTHGSALFERGETQILGVTTLNMLRMEQQIDSLAPETHKRYLHHYNFPPYSTGETGRVGS
PKRREIGHGALAERAIMPVLPKREEFPYAIRQVSEALSSNGSTSMGSVCASTLSLLNAGV
PLKAPVSGIAMGLVSDEVDGETRYVALTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKL
DGIPSEVLAAALGQARDARYTILEVMAEAISDPDEMSAFAPRVTSVKIPTDKIGEVIGPK
GKMINSITEQTGADISIEDDGTIYVGAADGPSAEAAIGMINAIANPQLPKVGERFLGTVV
KTAAFGAFVSLLPGKDGLVHISKLGNGKRIAKVEDVVKVGDKLRVEIADIDQRGKISLVV
VSDDDAADAKPADAPEAVEATEATEAAPAQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgacggacatcgaggtccacgaggcgactgccgttatcgacaacggcaagttcggctcg
cgctccatccgcttcgagaccgggcgcctcgcgcgtcaggccgcgggcagtgtggtggcg
tacctggacgacgaaaccatgcttctgagcgccacgacggcgtcgaagcaccccaaggag
cacttcgacttcttccccctcacggtggacgtcgaggagcgcatgtacgccgcgggccgc
atccccggctccttcttccggcgtgagggccgtccgagcacggacgccatcctcacctgc
cgcctgatcgaccgtccgctgcgcccgtccttcgtggacggcctgcgcaacgagatccag
gtcgtcatcacggtgatgagcctgaacccgaaggacctgtacgacgtcgtggcgatcaac
gccgcgtccgcgtcgacgcagctcgcgggcctgccgttctccggcccgatcggtggcgtc
cgcgtggcgctcatcgagggccagtgggtcgcgttcccgacctacgagcagctcgagaag
gccgtgttcgacatggtcgtcgcgggccgcgtggtctcctccggcgacgtcgcgatcatg
atggtcgaggccgaggccaccgacaacgtgatcgacatgatcgccgagggtgccaccgcc
ccgaccgaagaggtcgtggccgccggtctcgaggccgccaagccgttcatcaaggtcctc
tgcgaggcccaggcgcagctcgcccaggtcgccgcgaaggccaccggcgagtacccgacg
tacccggcctaccaggccgacgcgttcgaggccgtcgaggcgtccgcttccggtgagctc
gcccaggcgctgaccatcgcgggcaaggccgagcgcgagtccaagctcgacgaggtcaag
gccgccacgctggagaagctggccgagcagttcgagggtcgcgagaaggaggtcggcgcc
gcgttccgctcgctgaccaagaagctcgtgcgccagcgcatcctgcgcgacaacgtccgc
atcgacggccgtggcctcacggacatccgtgacctcggtgccgaggtggccgtgatcccg
aggacgcacggttcggcgctgttcgagcgcggcgagacccagatcctgggtgtcaccacg
ctgaacatgctgcgcatggagcagcagatcgactcgctggctcccgagacgcacaagcgc
tacctgcaccactacaacttcccgccctactcgaccggtgagaccggccgcgtgggttcg
ccgaagcgccgcgagatcggccacggcgcgctggccgagcgggcgatcatgcccgtgctg
cccaagcgcgaggagttcccctatgcgatccgccaggtgtccgaggcgctgagctccaac
ggctcgacgtccatgggctcggtctgcgcgtcgaccctgtcgctgctcaacgcgggtgtc
ccgctgaaggcgccggtctccggcatcgcgatgggtctcgtctccgacgaggtcgacggt
gagacccgttacgtggcgctgaccgacatcctcggtgccgaggacgcgttcggcgacatg
gacttcaaggtcgcgggcaccaaggagttcgtgacggctctgcagctcgacacgaagctc
gacggcatcccgtccgaggtgctggcggcggcgctgggccaggcccgcgacgcgcgctac
accatcctggaggtcatggccgaggccatctccgacccggacgagatgagcgccttcgct
ccgcgcgtgacgtcggtcaagatcccgaccgacaagatcggcgaggtcatcggcccgaag
ggcaagatgatcaactcgatcaccgagcagaccggtgccgacatctccatcgaggacgac
ggcacgatctacgtcggtgcggcggacggcccctcggccgaggccgcgatcggcatgatc
aacgcgatcgcgaacccgcagctgccgaaggtcggcgagcgcttcctgggcaccgtggtg
aagacggccgcgttcggcgcgttcgtctcgctgctgcccggcaaggacggcctcgtccac
atctcgaagctgggcaacggcaagcgcatcgcgaaggtggaggacgtcgtcaaggtcggc
gacaagctccgcgtcgagatcgccgacatcgaccagcgcggcaagatcagcctggtcgtc
gtgtccgatgacgacgctgcggacgccaagccggctgacgccccggaggccgtcgaggcc
accgaggccactgaggcggctcccgcgcagtga
DBGET
integrated database retrieval system
