Lentzea xerophila: ACRSBM_05410
Help
Entry
ACRSBM_05410 CDS
T11210
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lxr Lentzea xerophila
Brite
KEGG Orthology (KO) [BR:
lxr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lxr03009
]
ACRSBM_05410 (rimO)
Enzymes [BR:
lxr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACRSBM_05410 (rimO)
Ribosome biogenesis [BR:
lxr03009
]
Prokaryotic type
ribosomal protein modification factors
ACRSBM_05410 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
DUF3079
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XWW36055
LinkDB
All DBs
Position
1088868..1090280
Genome browser
AA seq
470 aa
AA seq
DB search
MSSPTTPRRVSLLTLGCARNEVDSEELAGRLGEGGWELVDEGADVVVVNTCGFVEQAKKD
SVDTLLAASDTGAKVVAVGCMAERYGKELADSLPEAAAVLGFDQYNDLAERLQDVLHGKP
VESHVPVDRRTLLPITPVKRQEAKDAVQVPGHGWGPTKVQRKRLDDAPVAPLKIASGCDR
RCSFCAIPSFRGAFVSRHPDEIVSEAMWLAENGVKELFLVSENSTSYGKDLPREQGALEQ
LLPRLASIPGVERVRVSYLQPAETKPSLVAAIAKTAKVANYFDMSFQHSSENVLRRMRRF
GDTDSFLKLVWQIREHAPEAGIRSNFIVGFPGETEADLRELERFLTEARLDAVGIFGYSD
EDGTEAEGLDGKLDADTIAERVQRIGNLVEELTSQRAEDRVGTEVVVLVEQEEDEENDCV
GRAEHQAPEVDGECIVLEAEELKRGDLVRCRVVDSEGVDLVVEVIEVLPT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttctcccaccactccgcgacgcgtgtcgctgctgaccctgggctgcgcccgcaac
gaggtcgactccgaagagctcgccggacggctcggcgagggcggctgggagctggtggac
gagggcgccgacgtcgtcgtcgtcaacacgtgcggcttcgtcgagcaggcgaagaaggac
tcggtcgacacgctgctcgccgcgtccgacaccggcgccaaggtcgtcgctgtcgggtgc
atggcggagcggtacggcaaggagctcgcggacagccttcccgaggcggccgcggtcctc
ggcttcgaccagtacaacgacctggccgagcggctgcaggacgtgctgcacggcaagccg
gtcgagtcgcacgtgccggtcgaccgccgcacgctgctgccgatcacgccggtcaagcgc
caggaggccaaggacgccgtccaggttcccgggcacggctgggggccgaccaaggtccag
cgcaagcgcctcgacgacgctcccgtggcgccgttgaagatcgcgtccggctgtgaccgc
cggtgcagcttctgcgccatcccgagtttccgcggcgcgttcgtgtcgcggcacccggac
gagatcgtttccgaggccatgtggctcgccgagaacggcgtcaaggagctgttcctcgtc
agcgagaactcgacgagctacggcaaggacctgccgcgcgagcagggcgccctcgaacag
ctcctcccgcggctggcgtccatccccggcgtcgagcgggtgcgggtcagctacctgcag
cccgccgagaccaagcccagcctcgtcgcggccatcgcgaagaccgcgaaggtcgcgaac
tacttcgacatgtcgttccagcactccagcgagaacgtgctgcggcgcatgcgccggttc
ggcgacaccgacagcttcctcaagctcgtgtggcagatccgcgagcacgcgcccgaggcc
ggcatccgcagcaacttcatcgtcggcttccccggcgagaccgaggccgacctgcgggag
ctggagcgcttcctcaccgaggcgcgcctcgacgcggtgggcatcttcggttactcggac
gaggacggcaccgaggccgaggggctcgacggcaagctcgacgcggacaccatcgccgaa
cgcgtccagcgcatcggcaacctcgtcgaggagctgacgagccagcgcgccgaggaccgg
gtcggcaccgaggtcgtcgtgctcgtcgagcaggaggaggacgaggagaacgactgcgtc
ggccgcgccgagcaccaggcgcccgaggtcgacggcgagtgcatcgtgctcgaggccgag
gaactcaagcgcggtgacctggtccggtgccgtgtcgtggactccgagggcgtcgacctg
gtggtcgaggtcatcgaggtgctcccgacatga
DBGET
integrated database retrieval system
