Lentzea xerophila: ACRSBM_05740
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Entry
ACRSBM_05740 CDS
T11210
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lxr Lentzea xerophila
Pathway
lxr03030
DNA replication
lxr03430
Mismatch repair
lxr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lxr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACRSBM_05740 (dnaE)
03430 Mismatch repair
ACRSBM_05740 (dnaE)
03440 Homologous recombination
ACRSBM_05740 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxr03032
]
ACRSBM_05740 (dnaE)
03400 DNA repair and recombination proteins [BR:
lxr03400
]
ACRSBM_05740 (dnaE)
Enzymes [BR:
lxr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACRSBM_05740 (dnaE)
DNA replication proteins [BR:
lxr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACRSBM_05740 (dnaE)
DNA repair and recombination proteins [BR:
lxr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACRSBM_05740 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
XWW43299
LinkDB
All DBs
Position
1157348..1160860
Genome browser
AA seq
1170 aa
AA seq
DB search
MLDGAAKVAPLFEEAERLGMTAVGMSDHGNMYGADEFYQTATKTGIKPIIGIEAYLAPHN
RLHKKPVFWGDPGQRGDDISGAGAYTHMTMWARNAAGLRNLFRLHTEASKTGYYYKPRMD
RELVAQHADGIIATTGCPSGEVQTRLRLGQVDEAIQAASDYQDIFGKDNFFLELMDHGLD
IERRVRDGLLEISRKLGIPPLATNDSHYVTKDQADTHSALLCVQSGKMLTDPNRFKFDGD
GYYLKSAEEMRQVWKDLPEACDNTLLVAEKIESYDDIWTVKDRIPNFEVPEGEDQASWFR
KEIRRGLEWRFRGQEVPDEYIKRCDFEAQVIIDKGFPAYFLIVADLINYARSVGIRVGPG
RGSAAGAAVSWAMGITNIDPIPHGLLFERFLNPERTAMPDIDIDFDDRRRGEMIRYASEK
YGADKVAQVITFGTIKTKAALKDSARVHHGQPGFAIADKISKALPPPIMAKDIPLNGIVN
KSHPRYGEAAEVRSLLETDAQVKEIFDTALGLEGLIRNAGVHACAVIMSKDPLTESIPLW
YRDDGSFITGWDYPSCENIGLLKMDFLGLRNLTVMGDAIENIEANRGKDAVPDFDTLPMD
DPETYALLGRGDTLGVFQLDGGPMRDLLRRMQPTSFEDIVAVGALYRPGPMGVNAHNDYA
DRKNGRQEVKPIHPQLEEPLKEILGETHGLIVYQEQIMFIAQEVAGYSMGRADVLRKAMG
KKKAEVLAKEFEGFREGMRNDPRGFSDEAIQALWDTILPFAGYAFNKSHAAAYGLISYWT
AYLKANFRAEYMAALLTSVGDNKDKSAVYLAECRRLGIKVLPPDVNESALRFGAVGTDIR
FGLGAIRNVGANVVESIIKSRKEKGAYTSFIDFMDKSELVVCNKRVIESLIKAGAFDSFG
NTRLSLIQIHEDAVDAVVPIKRKEAEGQFDLFGADSGDEPDDSASPLAHLKFGTEEYPRK
QMLSLEKEMLGLYVSSHPLDGAERILRKYAPRPIAVVLDDPPKEGELIVSGMISSIERRV
NKNGLPWAITVIEDLDASIEVLFFPKSYEVLRDDLELDSAVCVKGRVNWREDKMAIFGDG
VVPLDISDAEANPGADPPLVLGLHTRTLTPELIEELKIVFKSHEGQVAVHLEVQKRDKSK
EMLVVDNYRVQPTPSLFGDLKTIRGVTIQR
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacggagcggccaaggtggcgccgctgttcgaggaggccgagcggctcggcatg
accgctgtcggtatgagcgaccacggcaacatgtacggggccgacgagttctaccagacg
gcgacgaagaccggcatcaagccgatcatcggcatcgaggcctacctcgccccgcacaac
cgcctgcacaagaagccggtgttctggggcgaccccggtcagcgcggcgacgacatctcc
ggtgccggcgcgtacacccacatgacgatgtgggcgcggaacgcggccgggctgcgcaac
ctcttccgcctgcacaccgaggcgagcaagacgggctactactacaagccccgcatggac
cgtgagctcgtcgcgcagcacgccgacggcatcatcgccacgaccggctgcccgtccggc
gaggtgcagacccggctgcggctcgggcaggtcgacgaggcgatccaggccgcgtcggac
taccaggacatcttcggcaaggacaacttcttcctggaactgatggaccacggcctcgac
atcgagcgccgggtccgcgacggcctgctggagatcagccgcaagctcggcatcccgccg
ctcgcgaccaacgacagccactacgtcaccaaggaccaggcggacacgcactccgcactg
ctgtgcgtgcagtccggcaagatgctgaccgacccgaaccgcttcaagttcgacggtgac
ggctactacctcaagtccgccgaggagatgcgccaggtctggaaggacctgcccgaggcg
tgcgacaacaccctgctggtcgcggagaagatcgagtcctacgacgacatctggaccgtc
aaggaccgcatcccgaacttcgaggtgcccgagggcgaggaccaggcctcctggttccgc
aaggagatccggcgcggcctggagtggcggttccgcggccaggaggttcccgacgagtac
atcaagcgctgtgacttcgaggcccaggtcatcatcgacaagggcttcccggcgtacttc
ctgatcgtcgccgacctgatcaactacgcccgcagcgtcggcatccgggtcggtcccggc
cgtggttcggccgcgggcgccgcggtgtcgtgggcgatgggcatcacgaacatcgacccc
atcccgcacggtctgctgttcgagcggttcctgaaccccgagcgcaccgccatgcccgac
atcgacatcgacttcgacgaccgccgccgcggcgagatgatccgctacgccagcgagaag
tacggcgccgacaaggtcgcccaggtgatcacgttcggcaccatcaagaccaaggccgcg
ctgaaggactcggcgcgggtgcaccacggtcagccgggcttcgcgatcgccgacaagatc
tccaaggcgctgccgccgccgatcatggcgaaggacatcccgctcaacggcatcgtcaac
aagagccacccgcgctacggcgaggccgccgaggtccgctcgctgctcgagaccgacgcg
caggtgaaggagatcttcgacaccgcgctcgggctcgagggcctgatccgcaacgccggc
gtgcacgcctgcgcggtgatcatgtcgaaggacccgctcaccgagtccattccgctgtgg
taccgcgacgacggctcgttcatcaccggctgggactacccgtcgtgcgagaacatcggc
ctgctgaagatggacttcctcgggctgcgcaacctcacggtgatgggcgacgccatcgag
aacatcgaggccaaccgcggcaaggacgcggtcccggacttcgacacgctcccgatggac
gacccggagacctacgccctgctcggccgcggtgacacgctcggcgtgttccagctggac
ggcgggccgatgcgcgacctgctgcgccgcatgcagccgacgtcgttcgaggacatcgtc
gccgtcggcgcgctctaccgccccggtccgatgggtgtgaacgcgcacaacgactacgcg
gaccgcaagaacggccgccaggaagtcaagccgattcacccgcagctcgaggaaccgctc
aaggagatcctcggcgagacgcacggcctgatcgtctaccaagagcagatcatgttcatc
gcccaggaggtcgccggctactcgatgggccgcgcggacgtgctgcgcaaggcgatgggc
aagaagaaggccgaggtcctcgcgaaggagttcgagggcttccgggagggcatgcgcaac
gacccgcgcggcttctccgacgaggcgatccaggcgctgtgggacacgatcctcccgttc
gccggctacgcgttcaacaagtcgcacgcggccgcgtacggtctgatctcgtactggacg
gcgtacctcaaggcgaacttccgcgccgagtacatggccgccctgctgacgtcggtcggt
gacaacaaggacaagtcggcggtctacctcgccgagtgccgccgcctgggcatcaaggtc
ctgccgccggacgtcaacgagtcggcgctgcgcttcggtgcggtcggcacggacatccgc
ttcggcctgggcgcgatccgcaacgtcggcgcgaacgtcgtcgagtcgatcatcaagtcc
cgcaaggagaagggcgcctacacgtccttcatcgacttcatggacaagtccgagctcgtc
gtgtgcaacaagcgcgtgatcgagtcgctgatcaaggccggtgcgttcgactcgttcggc
aacacccgcctgtcgctgatccagatccacgaggacgcggtcgacgccgtcgtcccgatc
aagcgcaaggaggcggaggggcagttcgacctgttcggcgccgacagtggcgacgaaccg
gacgacagcgcctccccgctcgcgcacctcaagttcggcaccgaggagtacccgcgcaag
cagatgctgagcctcgagaaggagatgctggggctctacgtctcctcgcacccgctcgac
ggcgcggaacggatcctgcgcaagtacgcaccccggccgatcgcggtcgtgctcgacgat
ccgcccaaggaaggcgagctgatcgtctcgggcatgatctcgtcgatcgagcgccgggtg
aacaagaacggcctgccgtgggcgatcacggtcatcgaggacctggacgcctcgatcgag
gtgctgttcttcccgaagtcgtacgaggtgctgcgcgacgacctggagctcgactccgcc
gtgtgcgtgaaggggcgggtgaactggcgcgaggacaagatggcgatcttcggtgacggt
gtcgtcccgctcgacatcagcgacgcggaggccaaccccggcgcggacccgccgctcgtc
ctcgggctgcacaccaggacgctgacgcccgagctgatcgaggagctcaagatcgtgttc
aagtcgcacgagggccaggtcgccgtgcacctggaggtgcagaagcgcgacaagtcgaag
gagatgctggtggtggacaactaccgcgtccagccgacgccgtcgctcttcggtgacctc
aagacgatccgcggtgtgacgatccagcgttag
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