Lentzea xerophila: ACRSBM_05960
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Entry
ACRSBM_05960 CDS
T11210
Name
(GenBank) caspase, EACC1-associated type
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lxr Lentzea xerophila
Pathway
lxr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lxr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACRSBM_05960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lxr03019
]
ACRSBM_05960
03110 Chaperones and folding catalysts [BR:
lxr03110
]
ACRSBM_05960
03029 Mitochondrial biogenesis [BR:
lxr03029
]
ACRSBM_05960
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lxr04147
]
ACRSBM_05960
Enzymes [BR:
lxr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ACRSBM_05960
Messenger RNA biogenesis [BR:
lxr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ACRSBM_05960
Chaperones and folding catalysts [BR:
lxr03110
]
Heat shock proteins
HSP60 / Chaperonin
ACRSBM_05960
Mitochondrial biogenesis [BR:
lxr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ACRSBM_05960
Exosome [BR:
lxr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ACRSBM_05960
Exosomal proteins of other body fluids (saliva and urine)
ACRSBM_05960
Exosomal proteins of breast cancer cells
ACRSBM_05960
Exosomal proteins of colorectal cancer cells
ACRSBM_05960
Exosomal proteins of bladder cancer cells
ACRSBM_05960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Peptidase_C14
DUF6234
EF-hand_5
EF-hand_6
Motif
Other DBs
NCBI-ProteinID:
XWW36156
LinkDB
All DBs
Position
1194408..1196498
Genome browser
AA seq
696 aa
AA seq
DB search
MSRHALLVAVGDYEDPRLNALRAPQQDVTRLAAVLEDPEVGGFDSVRVVVDAPDHEIRRA
LEDTLAERGADDLVLVYFSCHGIKTPQQRLYFAATNTRQDRPAGTAVARTFVNELFEDCR
AASRVLLLDCCFSGAYGKGIKASVGGSVLDDRGGEGYLVLTASNAFEYAFEEERLSLEAP
QASVFTDVLLQGLSSGAADLDGDGWIDVQELFNYVHREVTARRRDQTPKFFAHGADAAIR
IARAGGSRLVPAQAVKPLYTPQQMLVARGFRAAAEPICRTLGPLGRRSVVLREDGRYVEL
AEAATIAEAFRVSDPRDELGASYVREVVRQVHQHVGDGAATAVVIAQALVENLLEALRAG
AHPIRLMRDLDAAYEAVWQHLADSRRVLGTADEVVELATSSSDQEIGELIGRAVSQVGWD
GTLIVEESNRLGLGVELTGGFRFAGGYLSGYFLTDSTRQVAELEDAYVLVCFDEISTVAP
LVPVLEKVMKEGRPLLVVAHDVTGEALATLVVNKVRETFKSVAVRGPSTAPEMDRLASVL
EARVLSADILHRAELAWLGRARKVVVSEHETVVVVDGDSEDSRVAVLTVGALSESALAER
RRRIERAVLTVRLAVAEGVVEGGGVALARAADALDGTVPAHAALADALRQPQRRLALNAG
LDSPEEPETPVLDSARVQTAVVDVAVRTAKRFLLLG
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcacgcgctgctcgtcgcggtcggtgactacgaagatcctcgcctcaacgcc
ctgcgcgcgccgcaacaggacgtgacgcgcctggccgccgtgctggaggacccggaggtc
ggcggcttcgactccgtgcgagtcgtcgtcgacgctcccgaccacgagatccggcgagcg
ctcgaggacacgctcgccgaacgcggcgcggacgacctcgtgctcgtctacttctcctgc
cacggcatcaaaaccccgcagcagcgcctgtacttcgcggccaccaacacccggcaggac
cgtccggcgggcacggccgtggcgcggacgttcgtcaacgagctgttcgaggactgccgc
gcggcgagccgggttctgctgctggactgctgtttcagcggtgcgtacggcaagggcatc
aaggcgtccgtcggcggatcggtgctcgacgaccgcggcggtgagggctacctcgtgctg
accgcgtcgaacgccttcgagtacgccttcgaagaggaacggctttcgcttgaggcgcct
caagcttccgtcttcaccgacgtgttgctgcagggattgtccagcggtgcggccgatctg
gacggcgatggctggatcgacgtccaggagctgttcaactacgtgcaccgcgaggtgacc
gcacgccgccgcgaccaaacgccgaagttcttcgcgcacggcgcggatgccgcgatccgg
atcgcacgggccggcggctcgcggctggtgcccgcgcaggccgtcaaaccgctgtacacg
cctcagcagatgttggtggcacgcggtttccgggcggccgccgaaccgatctgccggacg
ctgggaccgttggggcgccggtcggtcgtgctgcgcgaggacggccggtacgtcgagctg
gccgaggcggcgacgatcgcggaggcgttccgcgtctccgatccgcgcgacgagctgggg
gcgtcgtacgtccgcgaagtggtccggcaggtgcaccagcacgtcggggacggtgcggcg
acggcggtggtcatcgcgcaggcgctggtcgagaacctgctggaggccctgcgggcgggc
gcccacccgatccggttgatgcgcgacctggacgcggcgtacgaggccgtgtggcagcac
ctggcggacagccggcgggtgctcggcaccgccgacgaggtcgtcgagctcgccacgtcg
tcgtccgaccaggagatcggggagctgatcggcagggccgtgtcacaggtcggctgggac
ggcacgctgatcgtggaggagagcaacaggctggggctgggggtggagctgaccggtggc
ttccggttcgccggcgggtacctgtccggctacttcctcaccgacagcactcgccaggtg
gccgagctcgaggacgcttacgtgctcgtctgcttcgacgagatcagcacggtcgcacct
ctggtgccggtgctggagaaggtgatgaaggagggccggcccctcctggtggtcgcgcac
gacgtcaccggggaggcgctggcgacgctcgtggtcaacaaggtcagggagacgttcaag
tcggtcgcggtgcgcgggccgagcaccgcccccgagatggaccggctcgcgtccgtgctg
gaggcgcgggtgctctccgctgacatcctccaccgagccgaactggcctggctggggaga
gcgcgcaaggtcgtggtgagcgaacacgagaccgtcgtcgtggtcgacggcgactccgag
gactcccgcgtggccgtgctgacggtcggggcgttgagcgagtccgcgctggctgaacgg
cgccggcgaatcgagcgtgcggtgctcacggtccgtctcgcggtggccgagggtgtggtc
gaaggcggcggtgtcgcgctcgcccgcgccgcggacgccctggacggcaccgttcccgct
cacgccgcactggccgacgcgctgcggcagccgcaacggcgtctcgcgctcaacgcgggc
cttgactcgccggaggagccggagacgcccgtgctcgactcggcgcgggtgcagacggcg
gtcgtggacgtcgccgtacggaccgccaagcggttcctgctgctcgggtga
DBGET
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