KEGG   Lentzea xerophila: ACRSBM_29750
Entry
ACRSBM_29750      CDS       T11210                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
lxr  Lentzea xerophila
Brite
KEGG Orthology (KO) [BR:lxr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lxr03400]
    ACRSBM_29750
Enzymes [BR:lxr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ACRSBM_29750
    5.6.2.6  RNA 3'-5' helicase
     ACRSBM_29750
DNA repair and recombination proteins [BR:lxr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ACRSBM_29750
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_4th_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII AAA_25 DUF6406 Mg_chelatase
Other DBs
NCBI-ProteinID: XWW40656
LinkDB
Position
6288082..6292626
AA seq 1514 aa
MDVMEAFSPATRQWFAGAFAAPTQAQTGAWAAAAAGEHALVIAPTGSGKTLAAFLWALDR
LASSPVPAEPKRRCRVLYVSPLKALAVDVERNLRAPLAGIRQAAHRLGVTEPSITVGMRT
GDTSAEERRLFGRTPPDVLVTTPESLFLLLTSSARESLRGVETVIVDEVHAVAGTKRGGH
LALSLERLDALLERPAQRIGLSATVRPVEEISAFLAGGRPVSVVQPKTPKTIQVEVEVPV
EDMSVLGQPTGEVSGSAAGAEQRTSIWPSVEARVLELVRAHRSTIVFANSRRLAERLTAR
LNELADEAAELESFPAEAIGQSGLTVQKTASVARAHHGSMSREQRTTVEEDLKSGRLPCV
VATSSLELGIDMGAVDLVVQVEAPPSVASGLQRVGRAGHQVGAVSRGVMFPKFRGDLVSC
AVVAERMQNGSIEAVRFPRNPLDVLAQHIVAMVAMETWTVEDMTALVRRAAPFAGLPDSA
LHAVLDMLSGRYPSEEFGELRPRITWDRVNSELRGRPGSQRLAVTSGGTIPDRGLFAVMT
PPSENGPGSRVGELDEEMVYESRVGDTFLLGTSSWRVEDITHDRVIVVPAPGQPARMPFW
KGDAPGRPLELGRAMGRFLREMSTMEDSAARERAASAGLDAWATDNLLAYLGEQREATRH
VPNDRTVLVERFRDELGDWRLVVHSPFGAQVNAPWALAIAARLRERRGVEVQAAHSDDGI
VLRLPDALDHEGLEVTASAEDVLLDPDEVEQIVVAEVGGSALFAARFRECAARSLLLPRR
DPKRRTPLWQQRQRSAQLLSVAAKYESFPVVLEAMRECLQDVYDVPGLRELMSDVRARKV
RVVEVETPSPSPFARSLLFGYVGMFLYEADTPLAERRAAALSLDSTLLAELLGSEAIREL
LDPEVMAEVERSLQRLSEDRRPRHAEDTADLLRFLGDLSDAEALERGVPREWLDELVAQR
RAIRVRIAGEERTIAIEDAGRVRDALGVALPVGVPEAFTEPVADPLGDLLSRYARTHGPF
PAAEPATRFGLGVAVVTGVLERMAATGRLVRGELRPGGTHTEYCDADVLRRLRRASLARL
RSEVEPVEPAALGRFLPQWHGLGRRLRSAPTVDDVFSVVEQLAGAPLPASALESLLLPSR
LPGYYPALLDELTASGEVTWTGCGALAGGDGWIALAPADVADLLLPDLVPESIPESPLHT
AVLEALSGGALFFRQVADRASLSVTCTDAEVVGTLWDLVWAGLITNDTLSPLRALVSGGG
AAHKPRRAAPRGRYARLRAARPDLPSRTGPPTAAGRWSLAVRPAEDPTRRAHARAEAFLE
RHGVLTRGALDTERVTGGFSGVYKVLRAMEESGQVIRGYVVEGLGAAQFAARGAVDRLRA
LSRPPGQPSQADQAAVVLAAADPAQPYGAALAWPDPLGEGKHRPARKAGALAVLVDGTPA
LYVERGGRSLLSFTDDDPTLRTAANALSRAVRDGWLGQLAVQRADGEVALTSHLATVLQE
AGFRATPKGLRLRA
NT seq 4545 nt   +upstreamnt  +downstreamnt
atggacgtgatggaggcattctcaccggcgaccaggcagtggttcgccggcgccttcgcc
gcgcctacccaggcgcagacgggtgcgtgggcggccgcggcggcgggcgagcacgcgctg
gtcatcgccccgacgggctcgggcaagacgctggccgccttcctgtgggcactggaccgg
ctggcttcctctcccgtgcccgcggagccgaaacggcgctgccgggtgctgtacgtgtcg
ccgttgaaggcgctggcggtcgacgtcgaacgaaacctgcgcgctcccttggccggtatc
cggcaggccgcgcaccggctgggtgtgaccgagccgtcgatcacggtcggcatgaggacc
ggtgacacgtccgccgaggagcggcgcctgttcggccgcaccccgccggacgtgctggtg
acgacgccggagtcgttgttcctgctgctcacgtcgtcggcgcgcgagtcgctgcgcggc
gtggagacggtgatcgtcgacgaggtgcacgccgtggcgggcaccaaacgcggcgggcac
ctggcgttgtcactcgaacggctggacgcgctgctcgaacggcctgcgcagcggatcggg
ctgtcggcgacggtgcggccggtcgaggagatcagcgcgttcctcgcgggcgggcggccg
gtgtcggtggtgcagccgaagacccccaagaccatccaggtcgaggtggaggtgccggtc
gaggacatgtcggtgctcggccagccgacgggtgaggtgtcggggtcggccgccggagcc
gagcagcgcacctccatctggccctcggtcgaggcacgggtgctcgaactggtgcgggcg
caccggtcgacgatcgtcttcgcgaactcgcggcggctcgcggaacggctgaccgcgcgc
ctcaacgagctcgcggacgaggcggccgagctggagtccttccctgccgaggcgatcggt
cagtcgggtctgacggtgcagaagaccgcgtccgtggcccgtgcgcaccacgggtcgatg
tcgcgtgagcagcgcacgaccgtggaagaggacctgaagtcggggcggctgccgtgcgtg
gtggcgacgtcgtcgctggagctcggcatcgacatgggcgcggtcgacctggtggtgcag
gtggaggcgccgccgtcggtcgcgtccgggctgcagcgcgtcggccgcgcggggcaccag
gtgggcgcggtgtcgcggggcgtgatgttcccgaagttccgcggcgacctggtgtcgtgc
gcggtggtggcggaacggatgcagaacggctcgatcgaggcggtgaggttcccgcgcaac
ccgctggacgtcctggcgcagcacatcgtcgcgatggtggcgatggagacgtggacggtc
gaggacatgacggcgctggtgcggcgggcggcgccgttcgccgggctgccggactcggcg
ctgcacgcggtgctggacatgctgtccggccggtacccgtccgaggagttcggcgagctg
cggccgcggatcacgtgggaccgggtgaactccgagctgcgcggcaggccgggttcccag
cggctggcggtcacgtccggcggcacgatccccgaccgcgggctgttcgcggtcatgaca
ccgccgtccgagaacggtcctggctcccgcgtcggcgagctcgacgaggagatggtctac
gagtcgcgggtcggcgacacgttcctgctgggcacctcgtcgtggcgggtcgaggacatc
acgcacgaccgggtgatcgtggtgcccgcgccggggcagcccgcgcggatgccgttctgg
aagggcgacgctccgggccgtccgctggaactcggccgcgcgatgggcaggttcctgcgc
gagatgtccacaatggaggattcggccgctcgcgagcgggccgcgtccgccgggctggac
gcgtgggcgacggacaacctgctcgcgtacctgggcgagcagcgggaggccactcggcac
gtcccgaacgacaggaccgttctggtggaacggttccgcgacgagctgggcgactggcgg
ctcgtcgtgcactccccgttcggcgcccaggtcaacgcgccgtgggcgttggcgatcgcc
gcgcggctgcgcgaacgccgcggcgtcgaggtgcaggccgcgcactccgacgacggcatc
gtgctacgcctgccggacgcgctcgaccacgagggcctcgaggtgacggcgagcgccgag
gacgtgctgctcgatccggacgaggtcgagcagatcgtggtcgcggaggtgggcggctcg
gccttgttcgcggcccggttccgcgagtgcgccgcccgttccctgctgcttccccgccgt
gacccgaaacgccgcaccccgttgtggcagcagcgccagcgttcggcgcagctgctgtcg
gtggcggcgaagtacgagagcttcccggtggtcctggaagcgatgcgcgagtgcctgcag
gacgtctacgacgtgccgggtctgcgggagctgatgtcggacgtccgcgcgcgcaaggtg
cgcgtggtcgaggtcgagaccccgtcaccgtcgccgttcgcccgcagcctgctcttcggc
tacgtgggcatgttcctctacgaggcggacaccccgctggcggaacgccgtgcggcggca
ctgtcgctcgactcgacgctgctcgcggagctgctcggttcggaggcgatccgcgagctg
ctcgacccggaggtcatggccgaggtcgagcgcagcctgcaacgcctgtcggaggaccgc
cggccgcggcacgcggaggacaccgcggacctgttgcggttcctgggagatctctccgac
gcggaggccctcgaacggggcgtgccgcgcgagtggctggacgagctggtggcgcagcgc
cgggcgatccgggtgcgcatcgccggtgaggaacgcacgatcgcgatcgaggacgcgggc
agggtccgcgacgcgctcggtgtcgcgcttccggtcggcgtgccggaggccttcaccgaa
ccggtggcggatccgctgggcgacctgctgagccgctacgcccgcacccacgggccgttc
cccgcggcggaaccggccacccggttcggcctcggtgtggccgtggtgacgggtgtgctg
gaacgcatggccgccacgggccggctggtccgcggtgagctccgccccggtggcacgcac
accgagtactgcgacgcggacgtgctgcgccgcctgcgccgggcctcgctggcccggttg
cggtcggaggtggagccggtcgaacccgcggcgctgggccggttcctgccgcagtggcac
ggcctcggtcgccggctgcgttcggcgcccacggtcgacgacgtgttctcggtggtggaa
cagctcgccggggcgccacttcccgccagcgccctggaatccctgctgttgccgtcccgg
cttcctggctactacccggcgttgctggacgagctgaccgcgtccggcgaggtgacgtgg
accgggtgcggcgcgctggccggtggcgacggctggatcgcgctcgcccccgccgacgtg
gccgatctgctgctgcccgacctggtgccggagtcgatcccggagtcaccgctgcacacc
gcggtgctggaggcgctgtccggcggggcgctgttcttccgccaggtggccgaccgggcc
tcgctgtccgtgacgtgcacggatgccgaggtcgtcggcacgctgtgggacctggtgtgg
gcgggcctgatcacgaacgacacgttgtcgccactgcgcgcactggtgtccggtggcggc
gcggcgcacaaaccccgccgggccgcgccgcgaggccggtacgcccggttgcgcgcggct
cgtcccgacctgccgtcccgcacggggccgccgaccgccgccggtcgctggtcgctggcg
gtacggccggccgaggacccgacccgccgggcgcacgctcgcgccgaggccttcctggag
cgccacggcgtgctgacccgcggcgccctggacaccgagcgcgtgacgggtgggttcagc
ggcgtctacaaggtgctgcgggcgatggaggagtcgggccaggtcatccgcggttacgtc
gtcgaggggctgggcgccgcccagttcgcggcgcgaggtgcggtggaccggctgagggcg
ttgtcgcgtcctcccggccagccctcgcaggccgaccaggccgcggtggtgctcgccgcg
gcggatccagcccagccgtacggggccgctctggcgtggccggacccgttgggcgagggc
aaacaccggccggcccgcaaagccggtgcgctggcggtgctggtcgacggcaccccggcg
ctctacgtcgagagaggaggtagatcgctgctgtcgttcaccgacgacgacccgaccctg
cgcaccgccgcgaacgccctgagcagggctgtccgcgacggttggctgggccagctggcg
gtgcagcgagccgatggcgaggtcgcgctgacctcgcacctggcgacggtcctgcaggaa
gccggtttccgtgccactccgaagggtctgcgcctgcgggcgtga

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