Lentzea xerophila: ACRSBM_40285
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Entry
ACRSBM_40285 CDS
T11210
Symbol
gyrA
Name
(GenBank) intein-containing DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lxr Lentzea xerophila
Brite
KEGG Orthology (KO) [BR:
lxr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxr03032
]
ACRSBM_40285 (gyrA)
03400 DNA repair and recombination proteins [BR:
lxr03400
]
ACRSBM_40285 (gyrA)
Enzymes [BR:
lxr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACRSBM_40285 (gyrA)
DNA replication proteins [BR:
lxr03032
]
Prokaryotic type
DNA Topoisomerases
ACRSBM_40285 (gyrA)
DNA repair and recombination proteins [BR:
lxr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACRSBM_40285 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAGLIDADG_3
Intein_splicing
WhiA_N
Hint
Motif
Other DBs
NCBI-ProteinID:
XWW42612
LinkDB
All DBs
Position
complement(8379929..8383735)
Genome browser
AA seq
1268 aa
AA seq
DB search
MTETTLPPEHDRIEPVEIQQEMQNSYINYAMSVIVGRALPDVRDGLKPVHVRVLYSMFDS
GFRPDRGFNKCARVVGDVMGNYHPHGDSAIYDALVRLAQPWALRYPLIDGQGNFGSPGND
PAAAMRYCLPSQTRIKLADGGTVRIGDIVPGAQPNSDNPIDLKVLDRNGDPVRADMLFHS
GEHPTLKLRTKNGFELTGTHNHPVLCLVNVLGVPTLLWKLLEEIQPGDRVVMQRTQQELG
TTTVVKEYAAGILAGGFVSEGFASETRAGFNNTDKSYFDFVLNSYDLVVGGRRYVASRVI
QSGSLLHELDVQDLTALRQSPLAEVIGQRSAAKRVPEFIWQSGHTVKRAFLSSLFTGDGS
ASALPRNTVQISYSTRSAQLAREVQQLLLEFGVVSTQVNYDSGEIKVVITNRRDARLFSA
RVGFLGAKQDKLAAILDAIPVESRAMSSDHVPFVGEYVRANGASRRTEQDWLRRHNVDRI
ERWENSRDEIAERITNREVLDVVEPLVDGRFYYAEVASVTDAGVQPVFSIRVDTDDHAFI
TDGFVSHNTECRLSPLAMHMLADIEEETVDFRDNYDGRIQEPVVLPSRIPNLLINGSSGI
AVGMATNIPPHNLREVAEAVVWALDNHEASDEETLEAVIARIKGPDFPTYGQILGTSGIE
DAYRTGRGSVRMRAVVEVDEDAKGRTILVVTELPYQVNPDNLVENIAALVRDGKLTGIAN
IADESNRRIGMRIVVTLKRDAVAKVVLNNLYKHTQLQYSFGVNMLALVDGVPRTLRIDQM
IRHYMKHQIDVIQRRTRYRLRKAEERAHIWRGLVKALDQLDAVIALIRRSETPDIARTGL
MELLDVDEIQANAILEMQLRRLAALERQKIIDQLAEIEVEIADLKDILEKPERQRQIVRD
ELTAIVDKFGDDRRTKIIPFDGDVSMEDLIAVEDVVVTITRTGYAKRTKTDLYRAQKRGG
KGVQGAQLKQDDIVAHFFVCSTHDWILFFTNKGRVYRTKAYELPEANRNARGQHVANLLA
FQPDEEIAQVIQIKNYDVSPYLVLATRKGLVKKSKLSDFDSNRSGGLIGINLREDDELVG
AVLCAADDDLLMVSADGQSIRFHATDDVLRPMGRATSGVQGMRFNADDELLSVGVVQEGL
FVLVATDGGYSKRTPIEDYPVQGRGGKGVLTIQHDRRRGRLVGALIVDVDDELYAITSSG
GVIRTRAEQVRKAGRQTKGVRLMNLGESTTLIAVARNADEPVDVTNGETSVAEDSAADQA
VTPTDSAE
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagacgactctgccgccggagcacgaccgcatcgagccggtcgagatccagcag
gagatgcagaactcgtacatcaactacgcgatgtccgtcatcgtcggacgcgcgctgcca
gacgtgcgcgacgggctcaagcccgtgcacgtccgcgttctgtactcgatgttcgactca
ggcttccgtcccgaccgcggcttcaacaagtgcgcgcgcgtcgtcggcgacgtgatgggc
aactaccacccgcacggtgactcggcgatctacgacgccctggtgcgtctcgcccagccg
tgggcgctgcgctacccgttgatcgacggccagggcaacttcggctcgccgggcaacgat
ccggctgccgcgatgcgttattgtttgccttcgcaaacacgtatcaagctggctgacggt
ggcaccgttcggatcggcgacattgtgccgggcgcccagccgaacagcgacaacccgatc
gatctcaaggtgctagaccgcaacggcgacccggtgcgggccgacatgctgttccactcg
ggcgagcacccgacgttgaagctgcgcaccaagaacggcttcgagctcaccggcacgcac
aaccacccggtgctctgcctggtcaacgtgctcggcgtgccgaccctgctgtggaagctg
ctggaggagatccagcccggggaccgcgtggtcatgcagcggacacagcaggaactcggc
acgacgacggtcgtcaaggagtacgccgcgggcatcctcgccggtggattcgtgagcgaa
ggcttcgcgtcagagactcgcgcgggctttaacaacaccgacaagtcgtacttcgacttc
gtgctgaactcctacgacctcgtcgtgggtggccgtcgctatgtcgcctcccgtgtcatc
cagtcgggttcgttgctgcacgagctggatgtccaggatctgacggcgctgcggcagagc
ccgctcgccgaggtcatcggtcagcgcagtgcggccaagcgcgtgccggagttcatctgg
cagagcggccacacggtcaagcgcgcgttcctcagctcgttgttcaccggcgatggttcg
gcgtcggcgttgccgcgcaacaccgtgcagatctcgtactcgacgcgcagcgctcagctc
gcgcgtgaggtccagcagttgctgctggagttcggtgtcgtcagcactcaggtgaactac
gacagcggcgagatcaaggtcgtcatcaccaaccgccgcgacgcgcggctgttctcggcg
cgagtcggttttctcggcgccaagcaggacaagctggcggcgatcctcgacgccatcccg
gtcgagagccgggcgatgagcagcgaccacgtgccgttcgtcggcgagtacgtccgggcg
aacggtgcgagccgccggaccgagcaggactggttgcggcgccacaacgtcgaccggatc
gagcggtgggagaacagccgcgacgagatcgccgagcggatcacgaaccgcgaggtgctc
gacgtggtcgagccgttggtggacggccggttctactacgccgaggtcgcctccgtgact
gacgcgggtgtgcagccggtgttcagcatccgggtcgacacggacgaccacgcgttcatc
acggacgggttcgtcagccacaacacagaatgccggctctccccgttggccatgcacatg
ctggccgacatcgaggaagagaccgtcgacttccgcgacaactacgacggccgcatccag
gagccggtcgtcctcccgtcgcgcatcccgaacctgctgatcaacggcagctccggcatc
gcggtcggcatggcgaccaacatcccgccgcacaacctgcgcgaggtcgcggaggcggtg
gtgtgggcgctggacaaccacgaggcctccgacgaggagaccctcgaggccgtgatcgcc
cggatcaagggaccggacttcccgacgtacggccagatcctcggcacgtccggcatcgag
gacgcgtaccgcaccggccgcggctcggtccgcatgcgcgccgtcgtcgaggtggacgag
gacgccaagggccgcacgatcctggtcgtcaccgagctgccgtaccaggtcaacccggac
aacctcgtcgagaacatcgccgcgctcgtgcgcgacggcaagctcaccggcatcgccaac
atcgccgacgagtcgaaccgccgcatcggcatgcgcatcgtcgtcacgctcaagcgcgac
gccgtggcgaaggtcgtgctgaacaacctctacaagcacacccagctgcagtactcgttc
ggtgtgaacatgctggcgctggtcgacggcgtgccgcgcacgctgcggatcgaccagatg
atccgccactacatgaagcaccagatcgacgtcatccagcgcaggacgaggtaccgcctg
cgcaaggccgaagagcgcgcgcacatctggcgcggtctggtgaaggcgctcgaccagctc
gacgccgtcatcgcgttgatccgccggtccgagacgccggacatcgcgcgcaccggtctg
atggagctcctcgacgtcgacgagatccaggccaacgcgatcctggagatgcagctccgc
cgcctggccgccctggagcgccagaagatcatcgaccagctggccgagatcgaggtcgag
atcgccgacctcaaggacatcctcgagaagccggagcggcagcgccagatcgtgcgcgac
gagctcacggcgatcgtggacaagttcggcgacgaccgccggacgaagatcatcccgttc
gacggcgacgtgtccatggaggacctgatcgcggtcgaggacgtggtcgtcacgatcacc
cgcaccggctacgcgaagcgcaccaagaccgacctctaccgggcgcagaagcgcggcggc
aagggcgtccagggcgcacagctcaagcaggacgacatcgtcgcgcacttcttcgtgtgc
tcgacgcacgactggatcctgttcttcacgaacaagggccgtgtgtatcgcacgaaggcg
tacgagctgcctgaggcgaaccgcaacgcccgcggccagcacgtcgcgaacctcctcgcg
ttccagccggacgaggagatcgcgcaggtcatccagatcaagaactacgacgtgtcgccg
tacctggtgctcgccacccggaagggtctggtgaagaagtcgaagctttccgacttcgat
tccaaccgatcgggtggacttatcggcatcaacctccgcgaggacgacgagctggtcgga
gcggtgctctgcgctgccgacgacgacctgctcatggtgtccgccgacggccagtcgatc
cgcttccacgcgacggacgacgtgctgcgccccatgggtcgtgccacgtcaggcgtgcag
ggcatgcggttcaacgccgacgacgaactgctctcggtcggtgtcgtccaagagggtctg
ttcgttttggttgcgacggacggggggtactcgaagcgaacgccgatcgaggactacccg
gtccagggtcggggtggcaagggtgtgctgaccattcagcacgaccgccgacgtggcagg
ctggtcggagcgctcatcgtcgacgtcgacgacgagctctacgccatcacctcgagcggc
ggggtcatcaggacccgtgccgagcaggtgcgcaaggctggacggcagacgaagggggtg
cggctgatgaacctcggcgagagcaccactttgatcgccgtcgcacgcaacgcggatgag
cccgtcgacgtcactaacggtgagacgtctgtcgcggaggattctgccgccgaccaggca
gtcacccccaccgactcggccgagtag
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