Leifsonia xyli subsp. xyli CTCB07: Lxx00060
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Entry
Lxx00060 CDS
T00190
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxx03032
]
Lxx00060 (gyrB)
03400 DNA repair and recombination proteins [BR:
lxx03400
]
Lxx00060 (gyrB)
Enzymes [BR:
lxx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Lxx00060 (gyrB)
DNA replication proteins [BR:
lxx03032
]
Prokaryotic type
DNA Topoisomerases
Lxx00060 (gyrB)
DNA repair and recombination proteins [BR:
lxx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Lxx00060 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AAT88114
UniProt:
Q6AHN1
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All DBs
Position
5914..7905
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AA seq
663 aa
AA seq
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MTMEPNRAEAEHDYGANEIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEIVDNSVDEAL
AGYADNIEVMILPDGSVRVFDNGRGIPVDEHPVQKKSTVEVVLTILHAGGKFGGGGYAVS
GGLHGVGSSVVNALSTRLDVEVRRQGHVWRQSYRNGVPQAPLEQGEETEATGTTIVFWPS
PETFETVEFDYDTLRTRFQQMAFLNKGLRIAIADQRPVSAEGEADEESEPRGEVFLYEKG
LTDYVHYLNAAKKAEVVHDEIISFELEDTDRKIALEVAMQWTTSYNESVFTYANTINTHE
GGTHEEGFRAALTSLVNRYAREKNILKDKDDNLSGDDVREGLTAVISVKLSEPQFEGQTK
TKLGNTEAKAFVQKVAGDQLADWFDRNPNQAKEIIRKALQAATARIAARKARETARRKGL
LESGGMPGKLKDCQSKDPTLSEIFIVEGDSAGGSAVQGRNPETQAILPLRGKILNVEKAR
LDRALANNEVQAMITAFGAGIGEDFDPEKARYHKIVLMADADVDGQHITTLLLTLLFRYM
RPLIELGYVYLAQPPLYRLKWSNADDEYVYSDRDRDAFLAEGLAAGKRIPKDNGVQRYKG
LGEMDYKELWETTMNPETRTLLQVTLDDAAAVDEIFTTLMGEDVESRRSFIQKNAKDVRF
LDI
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggaaccgaacagggccgaggcggaacacgactacggcgcgaatgagatccag
gtcctcgaaggtctcgaagccgtccgcaagcgacccggtatgtacatcggttccaccggt
ccccgcggtcttcaccatctggtctacgagatcgtcgacaactccgtcgatgaggctctt
gccggatacgccgacaacatcgaggtgatgatcctgccggatggctcggtccgtgtcttc
gacaatgggcgcggaatcccggtggacgagcacccggtgcagaagaagtcgaccgtggaa
gtcgtgctcaccatcctgcacgccggaggaaagttcggcggtggcggctacgccgtctcc
ggcgggctccacggcgtcggcagctcagtggtgaacgcgctgtcgacgcggctggacgtc
gaggtccgccggcagggacacgtctggcggcagagctaccgcaatggtgttccgcaggcg
ccgctcgaacagggggaggagacggaagcgaccggcacgaccatcgtcttctggccgagc
cctgagacattcgagactgtcgagttcgactacgacacgctccgcacccgctttcagcag
atggcgttcctcaacaaaggcctccgtatcgcgatcgccgatcagcgcccggtgagtgct
gagggcgaggcagacgaggaatccgaaccgcgaggcgaggtgttcctttacgagaagggc
ctgaccgactacgttcactacctcaacgcggcgaagaaggcggaggtcgtgcatgacgag
atcatctcgttcgagttggaggacaccgatcgcaagatcgctctcgaagtcgcgatgcag
tggacgacgagctacaacgagtccgttttcacctacgcgaacacgatcaacacccacgag
ggcggcacacacgaagaaggcttccgcgccgcgctgacctcactcgtgaaccgttatgcc
cgcgagaagaacatcctcaaagacaaagatgacaacctctccggcgacgatgtgcgcgag
ggcttgaccgcggtcatctcggtgaaactctccgaaccgcagttcgaggggcagaccaag
accaagctcgggaacaccgaggcgaaggctttcgtgcagaaagtggccggcgatcagctc
gccgactggttcgaccgcaacccgaaccaggccaaagagatcatccgcaaggcgctccag
gctgcgaccgcgcgcatcgccgctcgcaaggcccgcgagaccgcccggcgcaaaggtctg
ctggaaagcggcgggatgccgggcaagctcaaggattgtcagtccaaggacccgacactt
tcggagatcttcatcgtcgagggcgattcggccggcggttccgctgtgcagggaagaaac
ccggagacgcaggccattctcccgctccgtggcaagatcctgaatgtggagaaggcccgc
ctcgaccgcgcgctcgcgaacaacgaagtacaggcgatgatcactgccttcggcgccggc
atcggtgaggacttcgacccggagaaggcgcgctatcacaagatcgtgctgatggccgat
gccgacgtggacggccagcacatcacgaccctgctgctcacgctgctcttccgctacatg
cggccgctcatcgaactcggctatgtgtatctcgcccagccgccgctctaccgcctcaaa
tggtcgaacgccgatgacgagtacgtctactccgatcgcgatcgcgacgccttcctggcg
gaggggctcgccgcagggaagcgcatcccgaaggacaacggcgtgcaacgatacaaaggt
ctgggtgagatggactacaaggagctctgggagaccaccatgaacccggagacccgcaca
ctgctccaggtgacgctcgacgacgcggccgcggtcgacgagatcttcaccacgctgatg
ggcgaggatgtcgagtcccgccgttcgttcatccagaagaacgcgaaggatgtgcggttc
cttgacatctga
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