KEGG   Leifsonia xyli subsp. xyli CTCB07: Lxx04370
Entry
Lxx04370          CDS       T00190                                 
Symbol
ribD
Name
(GenBank) riboflavin-specific deaminase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
lxx  Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx00740  Riboflavin metabolism
lxx01100  Metabolic pathways
lxx01110  Biosynthesis of secondary metabolites
lxx01240  Biosynthesis of cofactors
lxx02024  Quorum sensing
Module
lxx_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:lxx00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    Lxx04370 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Lxx04370 (ribD)
Enzymes [BR:lxx01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     Lxx04370 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     Lxx04370 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AAT88431
UniProt: Q6AGR4
LinkDB
Position
complement(439223..440248)
AA seq 341 aa
MTWEDPMRAALRLAANGPAAGVNPRVGCVLLDADGRTIAKGFHRGAGTPHAEADALGKLP
EGGARGTTAVVTLEPCNHWGRTGPCSEALLDAGVARVVYGIADPGERSRGGAERLRQGGV
EVTGGVLAAEIEEFLDDWLTVARLGRPHITVKWASSLDGRTAAADGTSRWITGTAARQRV
HEQREASDAIVVGTGTVLADDPSLTARGDAGELLPRQPTPVVVGTRAVPGDAAVFRHPQP
VIVEKTHDLVEVVADLHQRGFRRVYVEGGPTLSGAFVAAGLVDEYAIYLAPSLLGGPQLA
LGDIGVTTIGEQRRLRLLNVERLGGDLHLRAVPVPAPDQEG
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgacgtgggaagacccgatgcgggcagcgttgcggctggccgccaacggcccggcggca
ggggtgaacccgcgcgtgggctgcgtgctcctcgacgccgatggccgcacgatcgccaag
ggcttccaccgcggcgccggcaccccgcacgccgaagcggacgcgctcggcaagctgccc
gagggcggcgcccgcgggacgaccgccgtcgtcacactcgaaccctgcaaccactggggc
cgcaccggtccgtgctcggaggcgctgctggacgccggcgtcgcccgcgtcgtctacggc
atcgccgatcccggcgagcgctcccgcgggggcgccgaacggctgcgccagggcggcgtc
gaggtgaccggcggggtgctcgcggccgagatcgaagagtttctggacgactggctgacc
gtcgcccgcctgggccgcccgcacatcaccgtgaagtgggcgagcagtctggacggccgc
acagccgccgcagacggcacctcgcgatggatcaccggcacggccgctcgccagcgggtc
cacgaacagcgcgaggcgtccgacgccatcgtcgtgggaaccggaacggtgctcgccgac
gaccccagcctgaccgctcgcggggatgccggcgagctgctgccgaggcagccgacgccg
gtcgtggtcggcacgcgcgcggtacccggggatgcggcggtcttccggcacccgcagccc
gtgatcgtcgagaagacacacgatctggtggaggtcgtcgccgacctccaccagcgcggg
ttccgccgtgtgtacgtcgaaggcggcccgaccctctcgggggccttcgtcgccgcggga
ctcgtggacgagtacgcgatctacctggccccgtccctcctcggcggaccgcagctcgcc
ctcggcgacatcggcgtcacaaccatcggcgaacagcgcaggcttcgcctcctcaacgtc
gagcgactcggcggcgacctccacctccgggccgtcccggtcccggcccccgaccaggaa
ggctga

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