Leifsonia xyli subsp. xyli CTCB07: Lxx04510
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Entry
Lxx04510 CDS
T00190
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase, iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx00020
Citrate cycle (TCA cycle)
lxx00190
Oxidative phosphorylation
lxx00650
Butanoate metabolism
lxx00720
Other carbon fixation pathways
lxx01100
Metabolic pathways
lxx01110
Biosynthesis of secondary metabolites
lxx01120
Microbial metabolism in diverse environments
lxx01200
Carbon metabolism
Module
lxx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lxx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lxx_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Lxx04510 (sdhB)
00650 Butanoate metabolism
Lxx04510 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
Lxx04510 (sdhB)
00720 Other carbon fixation pathways
Lxx04510 (sdhB)
Enzymes [BR:
lxx01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Lxx04510 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_10
Fer4_17
Fer4_7
Fer4_9
Fer4
Fer4_16
Fer4_6
Fer4_2
Fer4_4
Fer4_18
Fer4_21
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
AAT88442
UniProt:
Q6AGQ3
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All DBs
Position
complement(450475..451236)
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AA seq
253 aa
AA seq
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MSTAVLETPPAPEAPIPSFTVTLIIRRFDPEKDTEPRWQDFDVELYPTDRILDALHKIKW
EQDGSLTFRRSCAHGICGSDAMRINGRNRLACKTLIKDLDISKPIYVEAIKGLPLEKDLI
VDMEPFFASYREVQPFLIANSTPPEDKERIQSVADRARFDDTTKCILCAACTSSCPVFWT
DGQYFGPAAIVNAHRFIFDSRDDNAQVRLDILNDKEGVWRCRTTFNCTDACPRGIQVTQA
IAEVKQAVMRGKP
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgccgtactggagactcccccggctcccgaagcccccatcccgtcgttcacc
gtcacactgatcatccgccgcttcgacccggagaaggacaccgagccgcgctggcaggac
ttcgacgtcgagctgtacccgaccgaccgcatcctggacgcgctgcacaagatcaagtgg
gagcaggacggctcgctcaccttccgccgctcctgcgcccacggcatctgcggctccgac
gcgatgcggatcaacggccgcaaccgcctggcctgcaagacgctgatcaaagacctggac
atctccaagccgatctacgtcgaggcgatcaagggcctgccgctggaaaaggatctcatc
gtcgacatggagccgttcttcgccagctaccgcgaggttcagcccttcctcatcgccaac
agcacgccgccggaggacaaggagcgcatccagtccgtcgccgaccgcgctcgcttcgac
gacacgaccaagtgcatcctgtgcgccgcgtgtacctcgtcctgcccggtcttctggacc
gacggccagtacttcggcccggctgcgatcgtgaacgcccaccgcttcatcttcgactcc
cgcgacgacaacgcgcaggtgcgcctcgacatcctgaacgacaaggagggcgtctggcgc
tgccgcacaaccttcaactgcaccgacgcctgcccccgcggcatccaggtcacccaggcc
atcgccgaggtcaagcaggccgtcatgcgcgggaagccgtag
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