Leifsonia xyli subsp. xyli CTCB07: Lxx06230
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Entry
Lxx06230 CDS
T00190
Symbol
fliA
Name
(GenBank) RNA polymerase, sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx02020
Two-component system
lxx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Lxx06230 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Lxx06230 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lxx03021
]
Lxx06230 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lxx02035
]
Lxx06230 (fliA)
Transcription machinery [BR:
lxx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Lxx06230 (fliA)
Bacterial motility proteins [BR:
lxx02035
]
Flagellar system
Flagellar assembly proteins
Stator
Lxx06230 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
Glyco_hydro_108
Motif
Other DBs
NCBI-ProteinID:
AAT88580
UniProt:
Q6AGB5
LinkDB
All DBs
Position
632192..633010
Genome browser
AA seq
272 aa
AA seq
DB search
MLTAQGQDGPPHRIALGHTAEKDSVNTKERDRLVTDHLPLVGYIVSDLCMKAAHLDRDEL
ASAGNLALPRAFDPDKGVTFASYARTRISGAISDELRSKDWVSRGMRKRIKAAQSARDDL
AKTLGRTPTEDEVASLLGIGKKALAEAMHHQATGPVSFDDLAPDEAAEITERDVFLRTAV
EALPDRLRLVVTRIFCEERQVKDVAAELGITHAAVSMTKSEAVRMLHEGWVRHFDAAAGQ
APSAKMTPKRTMYLNRLADMSKTAGPVLESSV
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaccgcgcagggccaagacggcccgccccaccgcatcgccctgggccacaccgcg
gagaaggactccgtgaacacgaaggaacgtgataggcttgtcaccgaccatctcccgctg
gtggggtacatcgtctccgatctgtgtatgaaggccgcccacctcgaccgggacgagctc
gcgtccgccgggaacctcgcccttccccgggcgttcgacccggacaagggcgtcaccttc
gcctcgtacgcccgcacccgcatctccggcgcgatctccgacgagctccgctcgaaggac
tgggtctcccgcggcatgcgcaagcgcatcaaggcggcgcagtccgcccgcgacgacctc
gcgaagacgctcgggcgcacaccgacggaggacgaggtcgcttcgctcctcggcatcggc
aagaaggccctcgctgaggcaatgcatcatcaggcgaccgggccggtcagcttcgacgac
ctcgccccggatgaggccgcggagatcaccgaacgggatgttttcctgcggaccgccgtc
gaggcgcttccagatcggctgcgtttggtcgtcactcgcatcttctgcgaggagaggcag
gtcaaagatgtcgctgccgaactcggcatcacccacgccgccgtctccatgaccaaaagc
gaagccgtccggatgctccacgaaggctgggtccgccatttcgacgccgccgcggggcaa
gcgccctcagcgaagatgacccccaaacgcaccatgtacctgaaccggctcgccgatatg
tccaaaaccgccggcccagtcctcgaaagcagcgtctga
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